RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 EFEMP2O95967 443 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 MYCP01106 439 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 TSPAN8P19075 237 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 CR2P20023 1033 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 ME2P23368 584 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 PKNOX1P55347 436 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 OXCT1P55809 520 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 MAPRE2Q15555 327 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 FAM43BQ6ZT52 329 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 PQLC1Q8N2U9 271 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 PDZD8Q8NEN9 1154 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 SMIM14Q96QK8 99 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 CFLARO15519 480 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 SUPT7LO94864 414 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 CRTAMO95727 393 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 TUFMP49411 452 aaKnown RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 MS4A2Q01362 244 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 TRIP10Q15642 601 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 UGT3A2Q3SY77 523 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 ZFP1Q6P2D0 407 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 LARP4Q71RC2 724 aaKnown RBP eCLIP20.56■□□□□ 0.881e-25■□□□□ 10.3
VEGFA-204ENST00000372064 RYBPQ8N488 228 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 USP13Q92995 863 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 EXT2Q93063 718 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 MRPL1Q9BYD6 325 aaKnown RBP20.56■□□□□ 0.88
VEGFA-204ENST00000372064 SARDHQ9UL12 918 aa20.56■□□□□ 0.88
VEGFA-204ENST00000372064 SCN5AQ14524 2016 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 KIF3CO14782 793 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 BCAS2O75934 225 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 HMGA1P17096 107 aaKnown RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 CORO1AP31146 461 aaKnown RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 ALDH7A1P49419 539 aaKnown RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 LRRC36Q1X8D7 754 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 USP41Q3LFD5 358 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 ASB2Q96Q27 587 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 TFB2MQ9H5Q4 396 aaKnown RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 ARIH1Q9Y4X5 557 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 PCDHGA7Q9Y5G6 932 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 STX16-NPEPL1H3BU86 382 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 PSMD12O00232 456 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 ACOT8O14734 319 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 CLDN11O75508 207 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 STC2O76061 302 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 LYNP07948 512 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 IRF1P10914 325 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 ATP4BP51164 291 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 RPL26P61254 145 aaKnown RBP20.55■□□□□ 0.88
VEGFA-204ENST00000372064 STX5Q13190 355 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 OR4D1Q15615 310 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 CLEC6AQ6EIG7 209 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 TMEM126BQ8IUX1 230 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 WBP2Q969T9 261 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 PLD4Q96BZ4 506 aa20.55■□□□□ 0.88
VEGFA-204ENST00000372064 H3BMM5 538 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 INSIG1O15503 277 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 TSPAN3O60637 253 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 RHOCP08134 193 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 MTHFD2P13995 350 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 AQP4P55087 323 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 LRP8Q14114 963 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 FASTKQ14296 549 aaKnown RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 DLG3Q92796 817 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 RMDN1Q96DB5 314 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 ATOH8Q96SQ7 321 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 ILVBLA1L0T0 632 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 FGF4P08620 206 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 PMLP29590 882 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 TAF1AQ15573 450 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 TMA16Q96EY4 203 aaKnown RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 TDRD1Q9BXT4 1180 aaKnown RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 RNF38Q9H0F5 515 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CWH43Q9H720 699 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CACNA2D2Q9NY47 1150 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 MED16Q9Y2X0 877 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 FBP2O00757 339 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 PRLP01236 227 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 UQCRBP14927 111 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 AFTPHQ6ULP2 937 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CHST9Q7L1S5 443 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 C16orf59Q7L2K0 433 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 DEFB128Q7Z7B8 93 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CLYBLQ8N0X4 340 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 PTGR2Q8N8N7 351 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-204ENST00000372064 LPGAT1Q92604 370 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 C19orf60Q96EN9 201 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CLSTN3Q9BQT9 956 aa20.54■□□□□ 0.88
VEGFA-204ENST00000372064 CBX4O00257 560 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 SH3BP2P78314 561 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 PDAP1Q13442 181 aaKnown RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 SETMARQ53H47 684 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 KIAA1841Q6NSI8 718 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.53■□□□□ 0.882e-35■■■■□ 22.7
VEGFA-204ENST00000372064 REM2Q8IYK8 340 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 BHLHE22Q8NFJ8 381 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 MDGA1Q8NFP4 955 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 OR4K2Q8NGD2 314 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 TRIM38O00635 465 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms