RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 AGAP2Q99490 1192 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 SUFUQ9UMX1 484 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 A0A087X0T9 212 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 MFSD11O43934 449 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 SOCS5O75159 536 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ECEL1O95672 775 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 FAM228BP0C875 321 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 MYBL1P10243 752 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 CCNB1P14635 433 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ARL4AP40617 200 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 MMP13P45452 471 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 SCAMP4Q969E2 229 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 TMEM74Q96NL1 305 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
RPF1-201ENST00000370654 NUDT22Q9BRQ3 303 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ABCG8Q9H221 673 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 MRPL47Q9HD33 250 aaKnown RBP13.14□□□□□ -0.31
RPF1-201ENST00000370654 NT5MQ9NPB1 228 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 TAAR2Q9P1P5 351 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 ANAPC7Q9UJX3 599 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 TMEM98Q9Y2Y6 226 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
RPF1-201ENST00000370654 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 GOLGA6CA6NDK9 693 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 C9orf172C9J069 976 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 FZD6O60353 706 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 SERPINC1P01008 464 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 CYP1A2P05177 515 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 GOLGA6DP0CG33 693 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 CCL4P13236 92 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PNLIPP16233 465 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 KELP23276 732 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 ARSDP51689 593 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 CDH6P55285 790 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 CTBSQ01459 385 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 DSC2Q02487 901 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PTSQ03393 145 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 ARHGEF7Q14155 803 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 LINC00303Q3SY05 128 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 FIGNQ5HY92 759 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 MARC1Q5VT66 337 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 RAET1GQ6H3X3 334 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 DOK6Q6PKX4 331 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 SLC30A9Q6PML9 568 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 VASH2Q86V25 355 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NAGSQ8N159 534 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 ATPAF2Q8N5M1 289 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 RCBTB1Q8NDN9 531 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 FAM71BQ8TC56 605 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 ZDHHC1Q8WTX9 485 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 TEKT4Q8WW24 435 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 USP7Q93009 1102 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 SCRN2Q96FV2 425 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 WBP1Q96G27 269 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 SEMA3CQ99985 751 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 STRADBQ9C0K7 418 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PHPT1Q9NRX4 125 aaPredicted RBP13.13□□□□□ -0.31
RPF1-201ENST00000370654 GOLGA6AQ9NYA3 693 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 SLC17A4Q9Y2C5 497 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PPIL1Q9Y3C6 166 aa13.13□□□□□ -0.31
RPF1-201ENST00000370654 PPM1DO15297 605 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 EML2O95834 649 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 PRLP01236 227 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 JMJD7P0C870 316 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
RPF1-201ENST00000370654 MPSTP25325 297 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 CD1CP29017 333 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 ALDH4A1P30038 563 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 GJC1P36383 396 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms