RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ESRP1Q6NXG1 681 aaKnown RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 SYT10Q6XYQ8 523 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 GLT6D1Q7Z4J2 308 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PRUNE1Q86TP1 453 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PARGQ86W56 976 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 SPATS2Q86XZ4 545 aaKnown RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 DCP2Q8IU60 420 aaKnown RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 AP2M1Q96CW1 435 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 C16orf45Q96MC5 204 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 ELF4Q99607 663 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 IL21RQ9HBE5 538 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 RAB6BQ9NRW1 208 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 DNAAF2Q9NVR5 837 aaKnown RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 HACD3Q9P035 362 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 OR1A2Q9Y585 309 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 SPO11Q9Y5K1 396 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PTPRZ1P23471 2315 aaPredicted RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 ERI2A8K979 691 aaKnown RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 CACNB4O00305 520 aaPredicted RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 CDX4O14627 284 aaPredicted RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 TOR1BO14657 336 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 YKT6O15498 198 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 PSMD3O43242 534 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 DFNA5O60443 496 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 AP2A1O95782 977 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 HTR1BP28222 390 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 ADRA1AP35348 466 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 BASP1P80723 227 aaKnown RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 PTK2BQ14289 1009 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 CYP1B1Q16678 543 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 RSPO4Q2I0M5 234 aaPredicted RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 ZNF423Q2M1K9 1284 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 CCDC137Q6PK04 289 aaKnown RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 C4orf22Q6V702 233 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 MACC1Q6ZN28 852 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 ZNF765Q7L2R6 523 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 NRSN1Q8IZ57 195 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 PDCD7Q8N8D1 485 aaKnown RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 GLIS1Q8NBF1 620 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 PLA2G15Q8NCC3 412 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 GRK7Q8WTQ7 553 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 TRABDQ9H4I3 376 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 GPR27Q9NS67 375 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 TM7SF3Q9NS93 570 aa14.81□□□□□ -0.04
COL9A1-204ENST00000370496 ZNF106Q9H2Y7 1883 aaKnown RBP14.81□□□□□ -0.04
COL9A1-204ENST00000370496 CFAP54Q96N23 3096 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 LRP4O75096 1905 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 K7ESM1 405 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 FANCGO15287 622 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 GAS8O95995 478 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 PYGLP06737 847 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ZSCAN5DPP0CG00 497 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 SDHBP21912 280 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-204ENST00000370496 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 GPR1P46091 355 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 SPINT3P49223 89 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 FNTAP49354 379 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 VPS41P49754 854 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 NFATC4Q14934 902 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 CDKN3Q16667 212 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 PRAMEF14Q5SWL7 426 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ALS2CLQ60I27 953 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 TTC27Q6P3X3 843 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 RFLNAQ6ZTI6 216 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 TECPR1Q7Z6L1 1165 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 HEATR4Q86WZ0 1026 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 RAVER1Q8IY67 606 aaKnown RBP14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 SCAMP4Q969E2 229 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 APOOQ9BUR5 198 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ABCG8Q9H221 673 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ERVMER34-1Q9H9K5 563 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 ETNK1Q9HBU6 452 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 PHPT1Q9NRX4 125 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-204ENST00000370496 DNAJC28Q9NX36 388 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 FEZ2Q9UHY8 353 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-204ENST00000370496 DMXL1Q9Y485 3027 aa14.8□□□□□ -0.04
COL9A1-204ENST00000370496 SPTY2D1-AS1A0A0U1RR47 76 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 A0A1B0GTQ1 180 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 H3BM21 787 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 SLC30A4O14863 429 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 AURKAO14965 403 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 APRTP07741 180 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 ZNF883P0CG24 379 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 MYCLP1P12525 358 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 EPHA8P29322 1005 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 RPL22P35268 128 aaKnown RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 KIAA1024LP59773 190 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 DPTQ07507 201 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 SEMA5AQ13591 1074 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 FZD2Q14332 565 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 TRIP13Q15645 432 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 INAVAQ3KP66 663 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 TPRG1LQ5T0D9 272 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 KCTD11Q693B1 232 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 PNCKQ6P2M8 343 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 RANBP10Q6VN20 620 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 PPP1R21Q6ZMI0 780 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 LINC00523Q86TU6 105 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms