RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IL1RAPL1Q9NZN1 696 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 LGALS13Q9UHV8 139 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 SMIM23A6NLE4 172 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 CXorf49A8MYA2 514 aaPredicted RBP12.3□□□□□ -0.44
TUBE1-202ENST00000368662 GOLGA8KD6RF30 607 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 AREL1O15033 823 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 MID1O15344 667 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 LHCGRP22888 699 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
TUBE1-202ENST00000368662 GCAP28676 217 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 GP5P40197 560 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 P2RY2P41231 377 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 ARSDP51689 593 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 RPS14P62263 151 aaKnown RBP12.3□□□□□ -0.44
TUBE1-202ENST00000368662 UBXN2BQ14CS0 331 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 PTPRRQ15256 657 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 CRY1Q16526 586 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 GALNT7Q86SF2 657 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 TSPAN33Q86UF1 283 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 TMPRSS6Q8IU80 811 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 GPR150Q8NGU9 434 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 EID2BQ96D98 161 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 PLEKHG4BQ96PX9 1271 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 OSBPL6Q9BZF3 934 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
TUBE1-202ENST00000368662 LMAN1LQ9HAT1 526 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 CD248Q9HCU0 757 aa12.3□□□□□ -0.44
TUBE1-202ENST00000368662 POLMQ9NP87 494 aaPredicted RBP12.3□□□□□ -0.44
TUBE1-202ENST00000368662 NEMP1O14524 444 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 PFDN6O15212 129 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 AP1G1O43747 822 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 KRT37O76014 449 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 KRT38O76015 456 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 GOT2P00505 430 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SPAM1P38567 509 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 STC1P52823 247 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CSE1LP55060 971 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CNTN1Q12860 1018 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 PTPRCAPQ14761 206 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 FASTKD1Q53R41 847 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 LRRC73Q5JTD7 316 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 AARS2Q5JTZ9 985 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 GRTP1Q5TC63 336 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 ZNF470Q6ECI4 717 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 PTAR1Q7Z6K3 402 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 DCAKDQ8WVC6 231 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 OMDQ99983 421 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CATSPERZQ9NTU4 200 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 EURLQ9NYK6 297 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 FAM170BA6NMN3 283 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 A8MX80 341 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CD3EAPO15446 510 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SYF2O95926 243 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 ACADMP11310 421 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 OGNP20774 298 aaKnown RBP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 COL9A1P20849 921 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 MC4RP32245 332 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 DRD3P35462 400 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 DGKEP52429 567 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 METAP1P53582 386 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 PIP5KL1Q5T9C9 394 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 AGBL2Q5U5Z8 902 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 STRA8Q7Z7C7 330 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 CILP2Q8IUL8 1156 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 DTX3LQ8TDB6 740 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.29□□□□□ -0.44
TUBE1-202ENST00000368662 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SIPA1Q96FS4 1042 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 TCF12Q99081 682 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 AGAP2Q99490 1192 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 GGT7Q9UJ14 662 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 SLC30A1Q9Y6M5 507 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 TRIOO75962 3097 aa12.29□□□□□ -0.44
TUBE1-202ENST00000368662 ATG2BQ96BY7 2078 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 GLYATL1P3A0A0U1RQE8 302 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 HMGB1P1B2RPK0 211 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-202ENST00000368662 TSPAN6O43657 245 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 RNASEH2AO75792 299 aaKnown RBP12.28□□□□□ -0.44
TUBE1-202ENST00000368662 PIAS1O75925 651 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 BPIP17213 487 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 SPRP35270 261 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-202ENST00000368662 PPARGP37231 505 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-202ENST00000368662 SPINT3P49223 89 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 DCDC1P59894 354 aa12.28□□□□□ -0.44
TUBE1-202ENST00000368662 CACNG1Q06432 222 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms