RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SLC45A3Q96JT2 553 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 CATSPERZQ9NTU4 200 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 AP4S1Q9Y587 144 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 A0A1B0GTL3 188 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 MTHFD2P13995 350 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 GFAPP14136 432 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 ZNF37AP17032 561 aaPredicted RBP18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 FGFR3P22607 806 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 FMO4P31512 558 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 GALNT7Q86SF2 657 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 DDIASQ8IXT1 998 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 LRTOMTQ8WZ04 291 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 TRMOQ9BU70 441 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC25A23Q9BV35 468 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 TRIM4Q9C037 500 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 SPAG4Q9NPE6 437 aa18.08■□□□□ 0.48
UBQLN4-201ENST00000368309 RPP40O75818 363 aaKnown RBP18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SERPINF2P08697 491 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SCNN1BP51168 640 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 ACLYP53396 1101 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 MARVELD2Q8N4S9 558 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 PCSK9Q8NBP7 692 aaKnown RBP18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 EME1Q96AY2 570 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 RMDN1Q96DB5 314 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 CDKN2AIPNLQ96HQ2 116 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 CYP2S1Q96SQ9 504 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 CROTQ9UKG9 612 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 FAM92AA1XBS5 289 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 FGF1P05230 155 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC10A3P09131 477 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 HLA-DPA1P20036 260 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 MAGEA11P43364 429 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 RGRP47804 291 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC7A2P52569 658 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 GRB7Q14451 532 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 FEM1CQ96JP0 617 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 BTRCQ9Y297 605 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SPO11Q9Y5K1 396 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 MTMR11A4FU01 709 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 TMEM189-UBE2V1I3L0A0 370 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 PIP5K1BO14986 540 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 TRIM24O15164 1050 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 PIM1P11309 404 aaPredicted RBP18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC6A4P31645 630 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC26A3P40879 764 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 NKX3-2P78367 333 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 ECT2LQ008S8 904 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 PAQR3Q6TCH7 311 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 RETREG3Q86VR2 466 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 Q9H521 79 aa18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
UBQLN4-201ENST00000368309 CA12O43570 354 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 LINC00032P0C843 101 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 CDKN1CP49918 316 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 YBEYP58557 167 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 STX1BP61266 288 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 RPS24P62847 133 aaKnown RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 ACVR1Q04771 509 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 VPS26BQ4G0F5 336 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 TRAF7Q6Q0C0 670 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 AMIGO2Q86SJ2 522 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 SUCOQ9UBS9 1254 aaKnown RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 SNX13Q9Y5W8 968 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 A0A0U1RQS6 177 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 NCF1BA6NI72 391 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 NCF1CA8MVU1 366 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 NR5A2O00482 541 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 SYN3O14994 580 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 VNN2O95498 520 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 IGLV3-27P01718 113 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 NCF1P14598 390 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 ATP6V1B1P15313 513 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 ABI1Q8IZP0 508 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 OR4K2Q8NGD2 314 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 PIP4K2CQ8TBX8 421 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 IKZF3Q9UKT9 509 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 LZTS1Q9Y250 596 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 TBC1D30Q9Y2I9 924 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 F5H5T6 163 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 RHOBTB1O94844 696 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 RTN3O95197 1032 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 STC1P52823 247 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 FAM189BP81408 668 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 PTPRRQ15256 657 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 TWIST2Q8WVJ9 160 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 SEMA4BQ9NPR2 832 aaPredicted RBP18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 RAB26Q9ULW5 256 aa18.06■□□□□ 0.48
UBQLN4-201ENST00000368309 A0A0J9YYE9 177 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 GPX3P22352 226 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 ROR2Q01974 943 aaKnown RBP18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 RHDQ02161 417 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 RAB44Q7Z6P3 723 aaPredicted RBP18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 CATSPER1Q8NEC5 780 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 AARSD1Q9BTE6 412 aaKnown RBP18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 COQ10BQ9H8M1 238 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 PDFQ9HBH1 243 aa18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 ZFP37Q9Y6Q3 630 aaPredicted RBP18.05■□□□□ 0.48
UBQLN4-201ENST00000368309 SUPT3HB4E1H0 165 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms