RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ITPKAP23677 461 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 SCNN1AP37088 669 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 UBE3AQ05086 875 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-203ENST00000368207 ZBTB17Q13105 803 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 LPIN1Q14693 890 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 LYPLAL1Q5VWZ2 237 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 HBEGFQ99075 208 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 LEF1Q9UJU2 399 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF229Q9UJW7 825 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 MYH1P12882 1939 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 PEX1O43933 1283 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 EPN2O95208 641 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 HPCAL1P37235 193 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 OLIG2Q13516 323 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 LRRC73Q5JTD7 316 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 TXNDC11Q6PKC3 985 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 KCTD13Q8WZ19 329 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-203ENST00000368207 MTF2Q9Y483 593 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-203ENST00000368207 KCNE2Q9Y6J6 123 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 SDK1Q7Z5N4 2213 aa12.3□□□□□ -0.44
PTPRK-203ENST00000368207 OR51F1A6NGY5 319 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 KCNH1O95259 989 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 FAM58BPP0C7Q3 252 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 COL6A2P12110 1019 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 HPGDP15428 266 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 GATMP50440 423 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 PPIDQ08752 370 aaKnown RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 TXNDC8Q6A555 127 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CLEC6AQ6EIG7 209 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ULK2Q8IYT8 1036 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ESAMQ96AP7 390 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ZFYVE19Q96K21 471 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF184Q99676 751 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 TRMOQ9BU70 441 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 EGFL7Q9UHF1 273 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 AP4S1Q9Y587 144 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 PIRO00625 290 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 HLA-DQB2P05538 268 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 SLC11A1P49279 550 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 KLF10Q13118 480 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 KIAA0408Q6ZU52 694 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 TMEM26Q6ZUK4 368 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CYP4Z1Q86W10 505 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 FSTL5Q8N475 847 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 GSTCDQ8NEC7 633 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 SLCO2A1Q92959 643 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 COL26A1Q96A83 441 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 SPAG4Q9NPE6 437 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 YIPF1Q9Y548 306 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 EIF2S1P05198 315 aaKnown RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CXCR3P49682 368 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 SLC7A2P52569 658 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 RUNX1T1Q06455 604 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.447e-7■□□□□ 9.8
PTPRK-203ENST00000368207 FAM46CQ5VWP2 391 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 GK5Q6ZS86 529 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 EID3Q8N140 333 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CLHC1Q8NHS4 586 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ZBED3Q96IU2 234 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 ANAPC2Q9UJX6 822 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 PKD1L3Q7Z443 1732 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 QSOX1O00391 747 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 EPHX1P07099 455 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 TNNI3P19429 210 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 FOXN2P32314 431 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CRATP43155 626 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 BANPQ8N9N5 519 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 WRAP53Q9BUR4 548 aaKnown RBP12.29□□□□□ -0.44
PTPRK-203ENST00000368207 HAPLN2Q9GZV7 340 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 KRT84Q9NSB2 600 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
PTPRK-203ENST00000368207 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 C9JVG2 144 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 S100A5P33763 92 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 SPAM1P38567 509 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 CENPAP49450 140 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 MSS51Q4VC12 460 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 RAVER1Q8IY67 606 aaKnown RBP12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ACTRT2Q8TDY3 377 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 TSSK3Q96PN8 268 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 NPY6RQ99463 290 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 LZTS1Q9Y250 596 aa12.28□□□□□ -0.44
PTPRK-203ENST00000368207 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms