RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SYPL2Q5VXT5 272 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 ZCCHC8Q6NZY4 707 aaKnown RBP11.58□□□□□ -0.55
SYNE1-204ENST00000367248 MAMDC4Q6UXC1 1216 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 GPRIN3Q6ZVF9 776 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 TMEM110Q86TL2 294 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 MICU2Q8IYU8 434 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 FUKQ8N0W3 1084 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 SHISA4Q96DD7 197 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 GBA3Q9H227 469 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 DCLRE1BQ9H816 532 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 MCM8Q9UJA3 840 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 AJAP1Q9UKB5 411 aaPredicted RBP11.58□□□□□ -0.55
SYNE1-204ENST00000367248 SGTAO43765 313 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 ALPPL2P10696 532 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 ME2P23368 584 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 EDNRBP24530 442 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 RGS1Q08116 209 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 USP4Q13107 963 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 GPR17Q13304 367 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CCINQ13939 588 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TBATAQ96M53 351 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 RAD21L1Q9H4I0 556 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 PCDH12Q9NPG4 1184 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 DNM1LO00429 736 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SPAM1P38567 509 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 GABRB2P47870 512 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 LPIN1Q14693 890 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SAMD4BQ5PRF9 694 aaKnown RBP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TTC27Q6P3X3 843 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SERINC5Q86VE9 423 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TRIM69Q86WT6 500 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 HMCESQ96FZ2 354 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CCT7Q99832 543 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 LRRC4CQ9HCJ2 640 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SOCS7O14512 581 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SERPINB10P48595 397 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TRAF2Q12933 501 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 ATP6V1C2Q8NEY4 427 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SPATA22Q8NHS9 363 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SEPHS2Q99611 448 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TBCDQ9BTW9 1192 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 FAIM2Q9BWQ8 316 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 GDAP2Q9NXN4 497 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 SORCS3Q9UPU3 1222 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 RASSF10A6NK89 507 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CCL22O00626 93 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 FYNP06241 537 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 BIKQ13323 160 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 FAM98BQ52LJ0 330 aaKnown RBP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 ZBTB49Q6ZSB9 765 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 EXOC3L1Q86VI1 746 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CFAP206Q8IYR0 622 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 TMEM132CQ8N3T6 1108 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 PSMG2Q969U7 264 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CENPTQ96BT3 561 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 C16orf70Q9BSU1 422 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CAB39LQ9H9S4 337 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 STYXL1Q9Y6J8 313 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 H3BQ06 376 aaPredicted RBP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 RFC2P35250 354 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 ZNHIT3Q15649 155 aaPredicted RBP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 CPSF6Q16630 551 aaKnown RBP eCLIP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 PDK4Q16654 411 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
SYNE1-204ENST00000367248 PCDHB1Q9Y5F3 818 aa11.58□□□□□ -0.56
SYNE1-204ENST00000367248 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
SYNE1-204ENST00000367248 FAM237BA0A1B0GVD1 139 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 GCATO75600 419 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 CBX6O95503 412 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 RUNX1T1Q06455 604 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 PEX6Q13608 980 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 CDK20Q8IZL9 346 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 ATG16L2Q8NAA4 619 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 PLEKHO2Q8TD55 490 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 KCTD13Q8WZ19 329 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 THAP11Q96EK4 314 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 TEKT5Q96M29 485 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 AZIN1O14977 448 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 SCN2BO60939 215 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 PFKMP08237 780 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 CFHP08603 1231 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 IDSP22304 550 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 ITPKAP23677 461 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 FGD3Q5JSP0 725 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 C16orf87Q6PH81 154 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 ABTB1Q969K4 478 aaPredicted RBP11.57□□□□□ -0.56
SYNE1-204ENST00000367248 SIPA1Q96FS4 1042 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 CDRT15Q96T59 188 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 BTBD10Q9BSF8 475 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 TRMOQ9BU70 441 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 ADPRHL2Q9NX46 363 aa11.57□□□□□ -0.56
SYNE1-204ENST00000367248 BIRC5O15392 142 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms