RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 TEX37Q96LM6 180 aa13.59□□□□□ -0.23
PRKN-205ENST00000366897 MID1IP1Q9NPA3 183 aa13.59□□□□□ -0.23
PRKN-205ENST00000366897 MARCH4Q9P2E8 410 aaPredicted RBP13.59□□□□□ -0.23
PRKN-205ENST00000366897 DNAJC25-GNG10A0A024R161 153 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 UNCXA6NJT0 531 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 MTSS1O43312 755 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 MOCS2O96007 188 aaPredicted RBP13.58□□□□□ -0.23
PRKN-205ENST00000366897 PCNAP12004 261 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 CCNA1P78396 465 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 POU4F1Q01851 419 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 RPS6KA2Q15349 733 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 HECTD2Q5U5R9 776 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 SMYD5Q6GMV2 418 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 GALNT18Q6P9A2 607 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 ALKAL1Q6UXT8 129 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 SNX29P2Q8IUI4 249 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 LRRC43Q8N309 656 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 PCYOX1LQ8NBM8 494 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 NUDT8Q8WV74 236 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 PCED1BQ96HM7 432 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.23
PRKN-205ENST00000366897 FANCEQ9HB96 536 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 MPP6Q9NZW5 540 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 PAIP2BQ9ULR5 123 aaKnown RBP13.58□□□□□ -0.23
PRKN-205ENST00000366897 RAD54BQ9Y620 910 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 NRCAMQ92823 1304 aa13.58□□□□□ -0.23
PRKN-205ENST00000366897 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 ADAM23O75077 832 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 MAP4P27816 1152 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 ARSDP51689 593 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 SFSWAPQ12872 951 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 ITGADQ13349 1161 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 ATP6AP1Q15904 470 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 CYP2A13Q16696 494 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 CYBRD1Q53TN4 286 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 SEPT8Q92599 483 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 BORCS5Q969J3 196 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 ACDQ96AP0 544 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 DUS3LQ96G46 650 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 CENPNQ96H22 339 aaPredicted RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 ZNF560Q96MR9 790 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 GPATCH1Q9BRR8 931 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 SLC39A8Q9C0K1 460 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 TREX1Q9NSU2 369 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
PRKN-205ENST00000366897 TIMM22Q9Y584 194 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 DGKBQ9Y6T7 804 aa13.58□□□□□ -0.24
PRKN-205ENST00000366897 KANSL1LA0AUZ9 987 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 UBXN8O00124 270 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 COQ9O75208 318 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 HGFP14210 728 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 PORP16435 677 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 GJA5P36382 358 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ITKQ08881 620 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 PPIL2Q13356 520 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 NR1D2Q14995 579 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 POLD3Q15054 466 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 PSMD5Q16401 504 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 PFKFB4Q16877 469 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ZNF829Q3KNS6 432 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 INTS11Q5TA45 600 aaKnown RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ABRAXAS1Q6UWZ7 409 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ARHGAP12Q8IWW6 846 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 TRPC4APQ8TEL6 797 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 FAR2Q96K12 515 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 VAT1Q99536 393 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 TBCCD1Q9NVR7 557 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 IFT80Q9P2H3 777 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 TTC3P53804 2025 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 LRRC37A2A6NM11 1700 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 CDK14O94921 469 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 GFAPP14136 432 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 SCAPQ12770 1279 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 BFSP2Q13515 415 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 PAN2Q504Q3 1202 aaKnown RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 ISCA2Q86U28 154 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 TWIST2Q8WVJ9 160 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 EMID1Q96A84 441 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 LRRC58Q96CX6 371 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 MYRFLQ96LU7 910 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 MUS81Q96NY9 551 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 GDAP2Q9NXN4 497 aa13.57□□□□□ -0.24
PRKN-205ENST00000366897 SMPD3Q9NY59 655 aaPredicted RBP13.57□□□□□ -0.24
PRKN-205ENST00000366897 CDH7Q9ULB5 785 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms