RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 DNMT3LQ9UJW3 386 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 PRMT5O14744 637 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 COX7A2P14406 83 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 CYP2B6P20813 491 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 PTPN3P26045 913 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 FCGRTP55899 365 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 RAB25P57735 213 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZBED5Q49AG3 693 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZCCHC8Q6NZY4 707 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 CARNMT1Q8N4J0 409 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 INTS10Q9NVR2 710 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 ANGPT4Q9Y264 503 aa11.8□□□□□ -0.52
CDC42BPA-202ENST00000366764 RPP40O75818 363 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ATP5C1P36542 298 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZNF420Q8TAQ5 688 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 C12orf42Q96LP6 360 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 APOBEC3GQ9HC16 384 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GUCA1CO95843 209 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 AKR1A1P14550 325 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GRK4P32298 578 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 LSM12Q3MHD2 195 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 TRIM40Q6P9F5 258 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 FBXO30Q8TB52 745 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 MYLPFQ96A32 169 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CLEC4MQ9H2X3 399 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 C2orf71A6NGG8 1288 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 IL6P05231 212 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 SMIM10L2AP0DMW4 78 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 SMIM10L2BP0DMW5 78 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ASMTP46597 345 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 WDR55Q9H6Y2 383 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 NUDT4Q9NZJ9 180 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 SH3BP4Q9P0V3 963 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 BCKDKO14874 412 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 PAGE1O75459 146 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 VNN1O95497 513 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CPSF4O95639 269 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CAPGP40121 348 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 KLHL12Q53G59 568 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZDHHC20Q5W0Z9 365 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 RHBDF2Q6PJF5 856 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 OR52K2Q8NGK3 314 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CSGALNACT1Q8TDX6 532 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 PIDD1Q9HB75 910 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 DTLQ9NZJ0 730 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 IKZF3Q9UKT9 509 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CLDN25C9JDP6 229 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 H7C0S8 307 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 OGNP20774 298 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GK5Q6ZS86 529 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 SYT12Q8IV01 421 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 AKT1S1Q96B36 256 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 OR52E6Q96RD3 313 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ATP13A3Q9H7F0 1226 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 KLQ9UEF7 1012 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 SUV39H1O43463 412 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 THRBP10828 461 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CCR3P51677 355 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ELP6Q0PNE2 266 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GRIK3Q13003 919 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 DUSP28Q4G0W2 176 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ANXA8L1Q5VT79 327 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ASRGL1Q7L266 308 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 AKAP14Q86UN6 197 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GMEB1Q9Y692 573 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GABRDO14764 452 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GDF10P55107 478 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 RFTN2Q52LD8 501 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CERCAMQ5T4B2 595 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CAB39LQ9H9S4 337 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CCDC182A6NF36 153 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 MPZL2O60487 215 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 NDST3O95803 873 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 LRG1P02750 347 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CXCR2P25025 360 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 CDK9P50750 372 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 BCL2L1Q07817 233 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 TUBA3CQ13748 450 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 VGLL4Q14135 290 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 HECTD2Q5U5R9 776 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 OMDQ99983 421 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GSTM1P09488 218 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 GPD2P43304 727 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 UBE3AQ05086 875 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 OFCC1Q8IZS5 231 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ZNF540Q8NDQ6 660 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 HEXDCQ8WVB3 486 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 MRPL45Q9BRJ2 306 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 BCO2Q9BYV7 579 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 ANKHQ9HCJ1 492 aa11.79□□□□□ -0.52
CDC42BPA-202ENST00000366764 H3BN98 237 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms