RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 RASA4BC9J798 803 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 AP3B1O00203 1094 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 RASA4O43374 803 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 RAMP2O60895 175 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 AP2A1O95782 977 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 AGTP01019 485 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 JCHAINP01591 159 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 KLKB1P03952 638 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 ACADMP11310 421 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 SLC6A4P31645 630 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CTSKP43235 329 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 MMP13P45452 471 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 COPAP53621 1224 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 GABPB1Q06547 395 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 PRPSAP1Q14558 356 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 ADGRF1Q5T601 910 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 TTC39BQ5VTQ0 682 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 KCTD11Q693B1 232 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 ARHGAP36Q6ZRI8 547 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 PRICKLE2Q7Z3G6 844 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CACUL1Q86Y37 369 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 TDRPQ86YL5 185 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 GATAD2AQ86YP4 633 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CNTD1Q8N815 330 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 BHMTQ93088 406 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CEP41Q9BYV8 373 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 C6orf106Q9H6K1 298 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 VPS37BQ9H9H4 285 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 PLK2Q9NYY3 685 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 FBXO10Q9UK96 956 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 CLEC4EQ9ULY5 219 aa11.32□□□□□ -0.6
CSNK1E-202ENST00000366216 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 NPC1O15118 1278 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 CDH16O75309 829 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 CLDN11O75508 207 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 BANF1O75531 89 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 PEX11BO96011 259 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 NFKB1P19838 968 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 GLDCP23378 1020 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 ATP5DP30049 168 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 OR1E1P30953 314 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 ELK3P41970 407 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 RENBPP51606 427 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 PCBP4P57723 403 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 IL10RBQ08334 325 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 SERINC3Q13530 473 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 SHBQ15464 509 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 GEN1Q17RS7 908 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 KLHL38Q2WGJ6 581 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 PRAMEF14Q5SWL7 426 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 FAM182AQ5T1J6 154 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 Q6ZNB5 142 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 C3orf62Q6ZUJ4 267 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 HTR3DQ70Z44 454 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 FAM217AQ8IXS0 508 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 AGGF1Q8N302 714 aaeCLIP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 TEX26Q8N6G2 289 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 EPS8L3Q8TE67 593 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 SORCS1Q8WY21 1168 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 MYEOVQ96EZ4 313 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 AGAP3Q96P47 875 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 EBNA1BP2Q99848 306 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 GORASP1Q9BQQ3 440 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 CENPHQ9H3R5 247 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 GLOD4Q9HC38 313 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 EURLQ9NYK6 297 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 THAP10Q9P2Z0 257 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 SLC24A2Q9UI40 661 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 ADAM21Q9UKJ8 722 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 CHMP2BQ9UQN3 213 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF510Q9Y2H8 683 aa11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 AAR2Q9Y312 384 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 COL27A1Q8IZC6 1860 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-202ENST00000366216 A0A1B0GVM2 712 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 EXOC1LA0A1B0GW35 172 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 TLDC2A0PJX2 215 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 TCAF2A6NFQ2 919 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms