RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 DSG4Q86SJ6 1040 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SRLQ86TD4 932 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NOP9Q86U38 636 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM135Q86UB9 458 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TRIM74Q86UV6 250 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 HOOK3Q86VS8 718 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NLRP14Q86W24 1093 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TRIM69Q86WT6 500 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZSWIM9Q86XI8 627 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 XYLT1Q86Y38 959 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TRIM59Q8IWR1 403 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 RHOT2Q8IXI1 618 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SLC35F3Q8IY50 421 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZNF683Q8IZ20 524 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PHACTR4Q8IZ21 702 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NRSN1Q8IZ57 195 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CACNA2D3Q8IZS8 1091 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CNPY4Q8N129 248 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SCML4Q8N228 414 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MREGQ8N565 214 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TTC39CQ8N584 583 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CCDC185Q8N715 623 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 GBP7Q8N8V2 638 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 KYQ8NBH2 561 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM145Q8NBT3 493 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NOA1Q8NC60 698 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM35BQ8NCS4 154 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CCDC197Q8NCU1 140 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 LRRN4CLQ8ND94 238 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZNF248Q8NDW4 579 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZNF548Q8NEK5 533 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMIEQ8NEW7 156 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 OR4C6Q8NH72 309 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PCDH19Q8TAB3 1148 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SNIP1Q8TAD8 396 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CCHCR1Q8TD31 782 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MAGEC3Q8TD91 643 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CXorf40AQ8TE69 158 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 AENQ8WTP8 325 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 GRK7Q8WTQ7 553 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PDCD6IPQ8WUM4 868 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM174Q8WUU8 243 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 UBLCP1Q8WVY7 318 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 DYDC1Q8WWB3 177 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 OR1E3Q8WZA6 343 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TTC9Q92623 222 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ARHGEF2Q92974 986 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PMEPA1Q969W9 287 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MAGOHBQ96A72 148 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CCDC74AQ96AQ1 378 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZNF653Q96CK0 615 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 GRAMD1AQ96CP6 724 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 C18orf8Q96DM3 657 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 HMCESQ96FZ2 354 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PGM2Q96G03 612 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MS4A14Q96JA4 679 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 HIC2Q96JB3 615 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NSMCE3Q96MG7 304 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 GDAP1L1Q96MZ0 367 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZNF578Q96N58 590 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 LENG8Q96PV6 779 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 DEPDC7Q96QD5 511 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SLC2A13Q96QE2 648 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 GFM1Q96RP9 751 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CCNL2Q96S94 520 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PCDHB18PQ96TA0 734 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NPY6RQ99463 290 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 KLF6Q99612 283 aaPredicted RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 EPAS1Q99814 870 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 AGPAT1Q99943 283 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SH3GL2Q99962 352 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NCAPGQ9BPX3 1015 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NUDT22Q9BRQ3 303 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 C11orf70Q9BRQ4 267 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 APOOQ9BUR5 198 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM109Q9BVC6 243 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 LGR4Q9BXB1 951 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 C1QTNF2Q9BXJ5 285 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TLR10Q9BXR5 811 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MAK16Q9BXY0 300 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 HDAC8Q9BY41 377 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CPEB1Q9BZB8 566 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SLC13A1Q9BZW2 595 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TRIM7Q9C029 511 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ZYG11BQ9C0D3 744 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SLC39A8Q9C0K1 460 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 NSRP1Q9H0G5 558 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMEM168Q9H0V1 697 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PCED1AQ9H1Q7 454 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ABCG8Q9H221 673 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 LRRN3Q9H3W5 708 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CLMPQ9H6B4 373 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 ERVMER34-1Q9H9K5 563 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 TMBIM4Q9HC24 238 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 CYP4F12Q9HCS2 524 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PREBQ9HCU5 417 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 MRPL47Q9HD33 250 aaKnown RBP1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 KCNK9Q9NPC2 374 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 SIX2Q9NPC8 291 aa1.55□□□□□ -2.16
RNU1-42P-201ENST00000364033 PCDH12Q9NPG4 1184 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms