RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-201ENST00000361716 GOLGA4Q13439 2230 aaKnown RBP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 TCRBV3S1A0A5B6 114 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 UNCXA6NJT0 531 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 NME4O00746 187 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 XPNPEP2O43895 674 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 MAFO75444 373 aaPredicted RBP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 ARIH2O95376 493 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 MPOP05164 745 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 BMP2P12643 396 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 BMP4P12644 408 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 PTPRAP18433 802 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 AGXTP21549 392 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 LMO2P25791 158 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 SERPINB10P48595 397 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 GJA9P57773 515 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 MPP1Q00013 466 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 MADCAM1Q13477 382 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 NFYCQ13952 458 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 STXBP5Q5T5C0 1151 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 DCAF15Q66K64 600 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 TBPL2Q6SJ96 375 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 SCIMPQ6UWF3 145 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 C4orf22Q6V702 233 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 LDB1Q86U70 411 aaPredicted RBP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 ABI1Q8IZP0 508 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 KCTD14Q9BQ13 255 aaPredicted RBP12.71□□□□□ -0.38
VAMP1-201ENST00000361716 SEZ6LQ9BYH1 1024 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 COQ3Q9NZJ6 369 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 PMF1-BGLAPU3KQ54 211 aa12.71□□□□□ -0.38
VAMP1-201ENST00000361716 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 C16orf96A6NNT2 1141 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 TPSB2P20231 275 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 FSHRP23945 695 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 HTR1BP28222 390 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 HLCSP50747 726 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 NCS1P62166 190 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 CLDN10P78369 228 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 IL5RAQ01344 420 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 TPSAB1Q15661 275 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 PAN2Q504Q3 1202 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SNAP47Q5SQN1 464 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 ZYG11AQ6WRX3 759 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SCML4Q8N228 414 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SPATA22Q8NHS9 363 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SMURF2Q9HAU4 748 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 WDR6Q9NNW5 1121 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 VPS28Q9UK41 221 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 PDZK1P1A8MUH7 402 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 DLGAP1O14490 977 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 ARPC2O15144 300 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 TSPAN3O60637 253 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 DBTP11182 482 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 CYP4B1P13584 511 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 ARF4P18085 180 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 YBX1P67809 324 aaKnown RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 DGUOKQ16854 277 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 SLC10A6Q3KNW5 377 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 CYBRD1Q53TN4 286 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 PEX5LQ8IYB4 626 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 HS3ST5Q8IZT8 346 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-201ENST00000361716 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 FTHL17Q9BXU8 183 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 BTRCQ9Y297 605 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 PCDHGA8Q9Y5G5 932 aa12.7□□□□□ -0.38
VAMP1-201ENST00000361716 H0YJX3 145 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 TFECO14948 347 aaPredicted RBP12.69□□□□□ -0.38
VAMP1-201ENST00000361716 TIMM44O43615 452 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 MGEA5O60502 916 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 CABYRO75952 493 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 FYNP06241 537 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 IFI30P13284 250 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 ENDOUP21128 410 aaKnown RBP12.69□□□□□ -0.38
VAMP1-201ENST00000361716 NMBRP28336 390 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 FMO4P31512 558 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 APLP1P51693 650 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 WDR45BQ5MNZ6 344 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 ANKRD52Q8NB46 1076 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 GMLQ99445 158 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 FEM1AQ9BSK4 669 aa12.69□□□□□ -0.38
VAMP1-201ENST00000361716 CCM2LQ9NUG4 571 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms