RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 AGMOQ6ZNB7 445 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 TMPRSS11BQ86T26 416 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 GPR180Q86V85 440 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 GPR135Q8IZ08 494 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 STK32AQ8WU08 396 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 BTBD9Q96Q07 612 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 PANX1Q96RD7 426 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 LEF1Q9UJU2 399 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 MATN3O15232 486 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 C2P06681 752 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 EXOC3L1Q86VI1 746 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SH3RF2Q8TEC5 729 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 ZSCAN32Q9NX65 697 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 FBXW11Q9UKB1 542 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PCDHGA4Q9Y5G9 962 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 BCLAF3A2AJT9 711 aaKnown RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SSR2P43308 183 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 RXRGP48443 463 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PURAQ00577 322 aaKnown RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SH3PXD2AQ5TCZ1 1133 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 ARCQ7LC44 396 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 TAF8Q7Z7C8 310 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 DTNBP1Q96EV8 351 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 KLHL32Q96NJ5 620 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 GPR21Q99679 349 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 NOCTQ9UK39 431 aaKnown RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 LYVE1Q9Y5Y7 322 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 TPSB2P20231 275 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SEMG2Q02383 582 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 TPSAB1Q15661 275 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 RDH11Q8TC12 318 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PPP1R14AQ96A00 147 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 MTERF3Q96E29 417 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 FUBP3Q96I24 572 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SLC25A51Q9H1U9 297 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 GKN1Q9NS71 199 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 KCND1Q9NSA2 647 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 ARIH1Q9Y4X5 557 aaPredicted RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 HLA-DQA2P01906 255 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 CHRNB2P17787 502 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 CACNG1Q06432 222 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 USP4Q13107 963 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 VITQ6UXI7 678 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 ZBTB2Q8N680 514 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 MFSD3Q96ES6 412 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SGK2Q9HBY8 427 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PDP2Q9P2J9 529 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 ANAPC2Q9UJX6 822 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SLC9A8Q9Y2E8 581 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 DHX15O43143 795 aaKnown RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 AP2A1O95782 977 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 HTR7P34969 479 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 UBAP2LQ14157 1087 aaKnown RBP18.56■□□□□ 0.56
CLIP2-202ENST00000361545 BHLHB9Q6PI77 547 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 CFAP206Q8IYR0 622 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PYDC1Q8WXC3 89 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 SLCO1B3Q9NPD5 702 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 MAPRE3Q9UPY8 281 aa18.56■□□□□ 0.56
CLIP2-202ENST00000361545 PTGES3LE9PB15 166 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 C2orf27AQ580R0 203 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CNKSR3Q6P9H4 555 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CPT1BQ92523 772 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 KLK6Q92876 244 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 ATG10Q9H0Y0 220 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 SAR1AQ9NR31 198 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 SLC17A7Q9P2U7 560 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 MRPS17Q9Y2R5 130 aaKnown RBP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 Q9Y3F1 56 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 PCDHB1Q9Y5F3 818 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 ENPP3O14638 875 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 NUDT17P0C025 328 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 GRSF1Q12849 480 aaKnown RBP eCLIP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 PDK4Q16654 411 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CLEC20AQ6ZU45 233 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 STYXQ8WUJ0 223 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF516Q92618 1163 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 NELL1Q92832 810 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 APOL4Q9BPW4 351 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 PSMD13Q9UNM6 376 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 POLR3HQ9Y535 204 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 NID2Q14112 1375 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 ROBO1Q9Y6N7 1651 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 A0A0U1RQF3 1178 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 PPEF2O14830 753 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 RECQL5O94762 991 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 GRIA3P42263 894 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 NAA20P61599 178 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 MPP1Q00013 466 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 PRKG2Q13237 762 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 FBXO48Q5FWF7 155 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CENPTQ96BT3 561 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 FAM124BQ9H5Z6 455 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 FZD10Q9ULW2 581 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 GABRQQ9UN88 632 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF780BQ9Y6R6 833 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms