RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 ASXL3Q9C0F0 2248 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 TTLL8A6PVC2 850 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 PLIN3O60664 434 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 MAPK12P53778 367 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 HYIQ5T013 277 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 CXorf57Q6NSI4 855 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RGL4Q8IZJ4 473 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RXFP2Q8WXD0 754 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 NELL1Q92832 810 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RBM4BQ9BQ04 359 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RBM4Q9BWF3 364 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RBM22Q9NW64 420 aaKnown RBP eCLIP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RPH3AQ9Y2J0 694 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 NUAK1O60285 661 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 MUC13Q9H3R2 512 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 H7C2Y5 167 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC6A2P23975 617 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 NOS2P35228 1153 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RTP1P59025 263 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 YES1P07947 543 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 EPORP19235 508 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 ZCCHC12Q6PEW1 402 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 DNAJB7Q7Z6W7 309 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 OR52K2Q8NGK3 314 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 HTR3CQ8WXA8 447 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 RFKQ969G6 155 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 FAM13CQ8NE31 585 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 TAS2R41P59536 307 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 CDKAL1Q5VV42 579 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 GALNTL5Q7Z4T8 443 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 OR5T3Q8NGG3 340 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 CXorf21Q9HAI6 301 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.3
SRGAP3-201ENST00000360413 MPZL2O60487 215 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 OR7A10O76100 309 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 CHRNA5P30532 468 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 FIP1L1Q6UN15 594 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 RAB11FIP2Q7L804 512 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 FAM131BQ86XD5 332 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 TDRPQ86YL5 185 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 NPAS2Q99743 824 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 U3KQV3 271 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 OR2AT4A6NND4 320 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MTHFD1P11586 935 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 TBL1YQ9BQ87 522 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ALG9Q9H6U8 611 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 SLCO1B3Q9NPD5 702 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 TBX1O43435 398 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 AIREO43918 545 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 GNAO1P09471 354 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 CHKAP35790 457 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 FATE1Q969F0 183 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 KLHL5Q96PQ7 755 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 GAKO14976 1311 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 AKAP8O43823 692 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 NDUFB10O96000 172 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MSL3P1P0C860 447 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 CTSKP43235 329 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 NAGLUP54802 743 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 CD83Q01151 205 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 PTPN20Q4JDL3 420 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 SNX20Q7Z614 316 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 C10orf107Q8IVU9 208 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 OR2L5Q8NG80 312 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MAFIPQ8WZ33 124 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 RABL2BQ9UNT1 228 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ULK1O75385 1050 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 NR2F1P10589 423 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 STOMP27105 288 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 EML3Q32P44 896 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 BAP1Q92560 729 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MMP13P45452 471 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 BST1Q10588 318 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ZZZ3Q8IYH5 903 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 TARS2Q9BW92 718 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms