RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PAPSS1O43252 624 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RAMP2O60895 175 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TOP3BO95985 862 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 EFR3AQ14156 821 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PM20D2Q8IYS1 436 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 KCTD4Q8WVF5 259 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 CELF6Q96J87 481 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TEFMQ96QE5 360 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PDP1Q9P0J1 537 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RGPD8O14715 1765 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ATP6AP2A0A1C7CYW4 349 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SH3PXD2BA1X283 911 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 STX16-NPEPL1H3BU86 382 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RNF225M0QZC1 329 aaPredicted RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TOR1BO14657 336 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 STX16O14662 325 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ADAMDEC1O15204 470 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ATP6AP2O75787 350 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 IDH3AP50213 366 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RPL38P63173 70 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PPP3CAQ08209 521 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 KCNA10Q16322 511 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CRY1Q16526 586 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ADAMTSL2Q86TH1 951 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FAXDC2Q96IV6 333 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PANX1Q96RD7 426 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ANKRA2Q9H9E1 313 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 GIT1Q9Y2X7 761 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ANKRD36CQ5JPF3 1778 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 MAP1BP46821 2468 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SGTAO43765 313 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 REM1O75628 298 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SLITRK3O94933 977 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RPL7AP62424 266 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TMEM62Q0P6H9 643 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 DNASE1L3Q13609 305 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 IL17AQ16552 155 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FBXO43Q4G163 708 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FBXO47Q5MNV8 452 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF410Q86VK4 478 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RASSF1Q9NS23 344 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SUCOQ9UBS9 1254 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 AASSQ9UDR5 926 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ARHGAP23Q9P227 1491 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 KCNU1A8MYU2 1149 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TPSB2P20231 275 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 BNIP3Q12983 259 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FASTKD3Q14CZ7 662 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TPSAB1Q15661 275 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CDC42EP5Q6NZY7 148 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF655Q8N720 491 aaPredicted RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SMARCD1Q96GM5 515 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RNF157Q96PX1 679 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SCAF8Q9UPN6 1271 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PLOD2O00469 737 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SUPT20HL2P0C7V6 817 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 NR4A1P22736 598 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 GLDCP23378 1020 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 DGKAP23743 735 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FAAH2Q6GMR7 532 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 OTOP1Q7RTM1 612 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ZZZ3Q8IYH5 903 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FAM129BQ96TA1 746 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 NAV1Q8NEY1 1877 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 H3BSA7 217 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CYB561D2O14569 222 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RFXANKO14593 260 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ENTPD3O75355 529 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 COL6A2P12110 1019 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CLCN2P51788 898 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 MERTKQ12866 999 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ARMC6Q6NXE6 501 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SLC22A16Q86VW1 577 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TTLL6Q8N841 843 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 DNAJC19Q96DA6 116 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SLC6A15Q9H2J7 730 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TBC1D24Q9ULP9 559 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RP1L1Q8IWN7 2480 aaPredicted RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 NFAT5O94916 1531 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CD163L1Q9NR16 1453 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 AURKAO14965 403 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 KDM4BO94953 1096 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 FTH1P02794 183 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CXCL8P10145 99 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ALDH4A1P30038 563 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 POU5F1Q01860 360 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 LAMTOR4Q0VGL1 99 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 MAP4K3Q8IVH8 894 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TMEM159Q96B96 161 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 NSMCE3Q96MG7 304 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 CCDC115Q96NT0 180 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 OMDQ99983 421 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 C1QTNF1Q9BXJ1 281 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms