RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SLC7A4O43246 635 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 PRAMEF11O60813 436 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ATXN1LP0C7T5 689 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 EPCAMP16422 314 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 OR1E1P30953 314 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ACVRL1P37023 503 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CLCN4P51793 760 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 KPNA1P52294 538 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 DUSP4Q13115 394 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ZNF789Q5FWF6 425 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 GALNT7Q86SF2 657 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 GPR65Q8IYL9 337 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 SPATA6LQ8N4H0 392 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 KYQ8NBH2 561 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC26A7Q8TE54 656 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MYEOVQ96EZ4 313 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 TSPAN17Q96FV3 270 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 FAR2Q96K12 515 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 LENG8Q96PV6 779 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CLSTN3Q9BQT9 956 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CYP4F11Q9HBI6 524 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CLEC1BQ9P126 229 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MTRRQ9UBK8 725 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ASB3Q9Y575 518 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 LOC100653049A0A140TA62 436 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 TLR5O60602 858 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 KRT34O76011 436 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 PDE5AO76074 875 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 ADH1AP07327 375 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 SATB1Q01826 763 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 NSUN2Q08J23 767 aaKnown RBP eCLIP14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 RFTN1Q14699 578 aaPredicted RBP14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 LSM12Q3MHD2 195 aaKnown RBP14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 ANKS3Q6ZW76 656 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 KBTBD6Q86V97 674 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 PDSS2Q86YH6 399 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 TMEM126BQ8IUX1 230 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC22A17Q8WUG5 538 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 TRAPPC9Q96Q05 1148 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 NDNQ99608 321 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 OLFM1Q99784 485 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 SEMA3CQ99985 751 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 TTLL2Q9BWV7 592 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 UNKQ9C0B0 810 aaKnown RBP14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 KLHL4Q9C0H6 718 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 POLR1EQ9GZS1 481 aaKnown RBP14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 FAM192AQ9GZU8 254 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 MFSD1Q9H3U5 465 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 ZDHHC2Q9UIJ5 367 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
NIPAL3-203ENST00000358028 F5H5T6 163 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 NEMP1O14524 444 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 SKAP2O75563 359 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 ATF6P18850 670 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 ATP5F1P24539 256 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 CYLC2Q14093 348 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 CSHL1Q14406 222 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 ZNF235Q14590 738 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC14A2Q15849 920 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 C5orf22Q49AR2 442 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 TECRLQ5HYJ1 363 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 HECTD2Q5U5R9 776 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 CILP2Q8IUL8 1156 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 AFAP1L2Q8N4X5 818 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 CCNYL1Q8N7R7 359 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 TXNDC5Q8NBS9 432 aaKnown RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 IFT43Q96FT9 208 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 FEM1CQ96JP0 617 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 SHCBP1LQ9BZQ2 653 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 WDR55Q9H6Y2 383 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 PDFQ9HBH1 243 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 NCKIPSDQ9NZQ3 722 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 C6orf203Q9P0P8 240 aaPredicted RBP14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 DENND4AQ7Z401 1863 aa14.3□□□□□ -0.12
NIPAL3-203ENST00000358028 LDB2O43679 373 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 SPATA31D3P0C874 917 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PIM1P11309 404 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 ARSDP51689 593 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PFKPQ01813 784 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 CREMQ03060 361 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 FAM83EQ2M2I3 478 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 AGAP9Q5VTM2 703 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 ZFP1Q6P2D0 407 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 TMEM184AQ6ZMB5 413 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 BNC2Q6ZN30 1099 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 SPATA31D4Q6ZUB0 917 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 SNX32Q86XE0 403 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 HPS6Q86YV9 775 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 HDAC10Q969S8 669 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 MAELQ96JY0 434 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 MSLNLQ96KJ4 702 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms