RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PFKFB4Q16877 469 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 C16orf59Q7L2K0 433 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 PCDH20Q8N6Y1 951 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 FAM156AQ8NDB6 213 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 AARSD1Q9BTE6 412 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 VCX3BQ9H321 246 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 SCUBE2Q9NQ36 999 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 FAM50BQ9Y247 325 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 MAGEA13PA6NCF6 341 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 PPP6CO00743 305 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 INSIG1O15503 277 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 HOXA2O43364 376 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 KDELR3O43731 214 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 RHOBTB1O94844 696 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 ME2P23368 584 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 FMO4P31512 558 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 GRAMD1BQ3KR37 738 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 MMEL1Q495T6 779 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 CYHR1Q6ZMK1 362 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 LPCAT1Q8NF37 534 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 BHLHE22Q8NFJ8 381 aaPredicted RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 SLC24A3Q9HC58 644 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 NLE1Q9NVX2 485 aaPredicted RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 ADA2Q9NZK5 511 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 FNDC3AQ9Y2H6 1198 aaKnown RBP15.82■□□□□ 0.12
PHTF1-201ENST00000357783 ANKRD12Q6UB98 2062 aa15.82■□□□□ 0.12
PHTF1-201ENST00000357783 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 SCAMP3O14828 347 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 MYCP01106 439 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 SUOXP51687 545 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 INHBCP55103 352 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 NFKB2Q00653 900 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 ZNF177Q13360 481 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 RFTN1Q14699 578 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 GSTA3Q16772 222 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 TYSND1Q2T9J0 566 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 SLC8B1Q6J4K2 584 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 MDGA1Q8NFP4 955 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PPP2R3CQ969Q6 453 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CAPNS2Q96L46 248 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 FBRSL1Q9HCM7 1045 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 MTRRQ9UBK8 725 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 AGO1Q9UL18 857 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PQBP1O60828 265 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CLDN11O75508 207 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 STC2O76061 302 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 SEC24AO95486 1093 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 SH3BP2P78314 561 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 IRX1P78414 480 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PTK2BQ14289 1009 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 GEN1Q17RS7 908 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CRIPAKQ8N1N5 446 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PQLC1Q8N2U9 271 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 LRRC43Q8N309 656 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 WBP2Q969T9 261 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 C19orf60Q96EN9 201 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 C3orf30Q96M34 536 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 NR1H4Q96RI1 486 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 ZBED2Q9BTP6 218 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PSMD13Q9UNM6 376 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PCDHGC4Q9Y5F7 938 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 GBF1Q92538 1859 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 KIF3CO14782 793 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PRLP01236 227 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 ZCCHC18P0CG32 403 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 GFAPP14136 432 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 HOXB8P17481 243 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 TUFMP49411 452 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CDKN1CP49918 316 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CYTH1Q15438 398 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 REP15Q6BDI9 236 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PAQR3Q6TCH7 311 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 LINGO4Q6UY18 593 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 RAB44Q7Z6P3 723 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 EFHBQ8N7U6 833 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PDZD8Q8NEN9 1154 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 OR9I1Q8NGQ6 314 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 NSUN5Q96P11 429 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 CYP2S1Q96SQ9 504 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 VN1R3Q9BXE9 311 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 TDRD1Q9BXT4 1180 aaKnown RBP15.81■□□□□ 0.12
PHTF1-201ENST00000357783 MUC3BQ9H195 1237 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 PTGDR2Q9Y5Y4 395 aa15.81■□□□□ 0.12
PHTF1-201ENST00000357783 FBP2O00757 339 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 SRP72O76094 671 aaKnown RBP15.8■□□□□ 0.12
PHTF1-201ENST00000357783 PENKP01210 267 aaPredicted RBP15.8■□□□□ 0.12
PHTF1-201ENST00000357783 LYNP07948 512 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 MTHFD2P13995 350 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 HMGA1P17096 107 aaKnown RBP15.8■□□□□ 0.12
PHTF1-201ENST00000357783 CR2P20023 1033 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
PHTF1-201ENST00000357783 CCL23P55773 120 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 PSME3P61289 254 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 PLD1Q13393 1074 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 PTPRRQ15256 657 aa15.8■□□□□ 0.12
PHTF1-201ENST00000357783 USP41Q3LFD5 358 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms