RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NPR3P17342 541 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARL1P40616 181 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 GRM5P41594 1212 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PRKCQQ04759 706 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 FOXD4Q12950 439 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 SPCS2Q15005 226 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PAFAH1B3Q15102 231 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 VPS26BQ4G0F5 336 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 DALRD3Q5D0E6 543 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF789Q5FWF6 425 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 BTBD8Q5XKL5 378 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 WSCD1Q658N2 575 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 HMBOX1Q6NT76 420 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARMCX2Q7L311 632 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PIWIL4Q7Z3Z4 852 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 UBE2Q1Q7Z7E8 422 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 FAM35AQ86V20 835 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR6P1Q8NGX9 317 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 RDH11Q8TC12 318 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ADAMTS16Q8TE57 1224 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ISL2Q96A47 359 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 HDAC11Q96DB2 347 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 NPY6RQ99463 290 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ALG9Q9H6U8 611 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 RCOR3Q9P2K3 495 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANGPTL3Q9Y5C1 460 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 SYCE1LA8MT33 242 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CDK2AP1O14519 115 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 LRIG2O94898 1065 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CES1P23141 567 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC7A1P30825 629 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TTKP33981 857 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ADCYAP1R1P41586 468 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CXCR3P49682 368 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 EIF2B5Q13144 721 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAPRE2Q15555 327 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CRY1Q16526 586 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 UGP2Q16851 508 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRIM71Q2Q1W2 868 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF484Q5JVG2 852 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SAMD4BQ5PRF9 694 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MOB2Q70IA6 237 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CARM1Q86X55 608 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD13BQ86YJ7 626 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NATD1Q8N6N6 113 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SHCBP1Q8NEM2 672 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 PPHLN1Q8NEY8 458 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 HCAR2Q8TDS4 363 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 COQ7Q99807 217 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 POLR1BQ9H9Y6 1135 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SMOXQ9NWM0 555 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SUCOQ9UBS9 1254 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 VPS28Q9UK41 221 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NUDT5Q9UKK9 219 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MTF2Q9Y483 593 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SMIM28A0A1B0GU29 152 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 AP3B1O00203 1094 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 INPP4BO15327 924 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SNAP91O60641 907 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 DAB1O75553 588 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MOCS2O96007 188 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MTHFD1P11586 935 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CPB1P15086 417 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF182P17025 639 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATP6V1B2P21281 511 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATP5F1P24539 256 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TAF6P49848 677 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATP6V0D1P61421 351 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCNA1P78396 465 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 HERC3Q15034 1050 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 KYAT1Q16773 422 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 FAM187BQ17R55 369 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 OTUD3Q5T2D3 398 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 PKN3Q6P5Z2 889 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC27A1Q6PCB7 646 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 OSTM1Q86WC4 334 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLIP4Q8N3C7 705 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MINDY2Q8NBR6 621 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR52K2Q8NGK3 314 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 HMGCLL1Q8TB92 370 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 DNAJB14Q8TBM8 379 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAGEE2Q8TD90 523 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TEKT5Q96M29 485 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SEPHS2Q99611 448 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MRPL57Q9BQC6 102 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC25A23Q9BV35 468 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 DUSP16Q9BY84 665 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 RHOBTB2Q9BYZ6 727 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF385DQ9H6B1 395 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 MRPL40Q9NQ50 206 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCDC177Q9NQR7 707 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 FBXO5Q9UKT4 447 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 OAZ3Q9UMX2 235 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CRYL1Q9Y2S2 319 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms