RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 VPS45Q9NRW7 570 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 RGS18Q9NS28 235 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 ARHGAP10A1A4S6 786 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 PIP5K1BO14986 540 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 NPHS1O60500 1241 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 ZNF678Q5SXM1 525 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MARC1Q5VT66 337 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 KRT80Q6KB66 452 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 LARP4Q71RC2 724 aaKnown RBP eCLIP15.25■□□□□ 0.037e-7■■□□□ 12
PTBP1-203ENST00000356948 KLHDC8BQ8IXV7 354 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 NCSTNQ92542 709 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 SEMA3CQ99985 751 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 CATSPERBQ9H7T0 1116 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 SP110Q9HB58 689 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 NME4O00746 187 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 CDK14O94921 469 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 ATXN1LP0C7T5 689 aaKnown RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 POLD3Q15054 466 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 CCDC92Q53HC0 331 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 DDIASQ8IXT1 998 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 ARRDC2Q8TBH0 407 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 ASB9Q96DX5 294 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 ACOX2Q99424 681 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 CNOT6Q9ULM6 557 aaKnown RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 VCANP13611 3396 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 CCDC162PA2VCL2 907 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 PIM1P11309 404 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 COL6A2P12110 1019 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 RGS2P41220 211 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 RGRP47804 291 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 IKBKEQ14164 716 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 FUT11Q495W5 492 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 UGT3A1Q6NUS8 523 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 NANOGNBQ7Z5D8 188 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 METTL23Q86XA0 190 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 RBM12BQ8IXT5 1001 aaKnown RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 KPNA6O60684 536 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 SNRPB2P08579 225 aaKnown RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 MTHFD2P13995 350 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 RABL3Q5HYI8 236 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 AGAP9Q5VTM2 703 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 CST9Q5W186 159 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 AFMIDQ63HM1 303 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 DGCR14Q96DF8 476 aaKnown RBP15.24■□□□□ 0.03
PTBP1-203ENST00000356948 MUC3BQ9H195 1237 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 Q9H521 79 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
PTBP1-203ENST00000356948 A0A087X1B8 175 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 TRIM43BA6NCK2 446 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 TRPC5OSA6NMA1 111 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 NRP2O60462 931 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 SLC5A2P31639 672 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 HADHAP40939 763 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CASP2P42575 452 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 KCNQ1P51787 676 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 LPIN1Q14693 890 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 C19orf60Q96EN9 201 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CDK15Q96Q40 435 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CCT7Q99832 543 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 PAIP1Q9H074 479 aaKnown RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 SLC25A51Q9H1U9 297 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 A0A0J9YVX5 310 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 UBA6A0AVT1 1052 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 HOXC13P31276 330 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CHST15Q7LFX5 561 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 ZNF683Q8IZ20 524 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 DNAJB14Q8TBM8 379 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 TMEM79Q9BSE2 394 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 RBM38Q9H0Z9 239 aaKnown RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 UNC93B1Q9H1C4 597 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 NSMCE4AQ9NXX6 385 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CD300AQ9UGN4 299 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 GABRQQ9UN88 632 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 A0A0J9YYE9 177 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 GOLGA8CPA6NN73 597 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 AKAP10O43572 662 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 GATMP50440 423 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 HPCAP84074 193 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 C18orf21Q32NC0 220 aaPredicted RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 C16orf87Q6PH81 154 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 IRGQQ8WZA9 623 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 TMEM74Q96NL1 305 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 C1orf50Q9BV19 199 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 CCSER2Q9H7U1 834 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 BPIFA1Q9NP55 256 aa15.23■□□□□ 0.03
PTBP1-203ENST00000356948 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
PTBP1-203ENST00000356948 VPS28Q9UK41 221 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms