RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CYB5AP00167 134 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SERPINA1P01009 418 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAUP35544 74 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PTPN9P43378 593 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZMYND11Q15326 602 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM151BQ6UXP7 276 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ATG14Q6ZNE5 492 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ARHGAP22Q7Z5H3 698 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZCCHC9Q8N567 271 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TCF25Q9BQ70 676 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TOR4AQ9NXH8 423 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 NFS1Q9Y697 457 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM25EA8MYX2 175 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SUV39H1O43463 412 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ALOX12P18054 663 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 BLKP51451 505 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SRP54P61011 504 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FOXM1Q08050 763 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 BNIP2Q12982 314 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TMC5Q6UXY8 1006 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 RTL4Q6ZR62 310 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CDH24Q86UP0 819 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PPTC7Q8NI37 304 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 AGAP11Q8TF27 550 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TEFMQ96QE5 360 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 HIST1H2AAQ96QV6 131 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 EBNA1BP2Q99848 306 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SEMA3CQ99985 751 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ARHGAP9Q9BRR9 750 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 C1QTNF1Q9BXJ1 281 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TM6SF2Q9BZW4 377 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM27Q9HBJ8 222 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SAR1AQ9NR31 198 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 A0A1W2PQ67 120 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GRXCR2A6NFK2 248 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PLGP00747 810 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 IDH2P48735 452 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CCNHP51946 323 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SLC18A1P54219 525 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 XIAPP98170 497 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 DPYSL3Q14195 570 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SRFBP1Q8NEF9 429 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SHDQ96IW2 340 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FBXO6Q9NRD1 293 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 VPS45Q9NRW7 570 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SLC27A5Q9Y2P5 690 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 N4BP2Q86UW6 1770 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 A0A1W2PQ72 361 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RGSL1A5PLK6 1076 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 A6NHS1 94 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM86B1E9PN63 330 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TRAFD1O14545 582 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TCEA3O75764 348 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM86B2P0C5J1 330 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BMT2Q1RMZ1 405 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CPTPQ5TA50 214 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM91A1Q658Y4 838 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TMPRSS6Q8IU80 811 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DCAKDQ8WVC6 231 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PIH1D2Q8WWB5 315 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BAP1Q92560 729 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DNASE1L2Q92874 299 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DUSP9Q99956 384 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NUDT5Q9UKK9 219 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DERAQ9Y315 318 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC42Q9Y546 428 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 H3BUI4 141 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RIPK2O43353 540 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CHRNGP07510 517 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLC35G6P0C7Q6 338 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ALAS2P22557 587 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RARRES1P49788 294 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LARS2Q15031 903 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TARBP2Q15633 366 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NEDD8Q15843 81 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TCHHL1Q5QJ38 904 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TAPT1Q6NXT6 567 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CYP2R1Q6VVX0 501 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLC41A1Q8IVJ1 513 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ALLCQ8N6M5 410 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC46Q96FV0 321 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SGK2Q9HBY8 427 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RHBDL2Q9NX52 303 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MRPL42Q9Y6G3 142 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MAP2P11137 1827 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SCAMP3O14828 347 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CTPS1P17812 591 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CDK18Q07002 472 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MYBPC3Q14896 1274 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BRMS1LQ5PSV4 323 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MSANTD2Q6P1R3 559 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DHRSXQ8N5I4 330 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 UBR7Q8N806 425 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FBXO30Q8TB52 745 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLC22A17Q8WUG5 538 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms