RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NSMCE3Q96MG7 304 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 CYP2S1Q96SQ9 504 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 SEMA6AQ9H2E6 1030 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 PARNO95453 639 aaKnown RBP21.32■■□□□ 1
PTPN18-202ENST00000347849 ACRP10323 421 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 SLC5A2P31639 672 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 SLC1A2P43004 574 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 NR1H2P55055 460 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 APOFQ13790 326 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 PARP15Q460N3 678 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 ZNF789Q5FWF6 425 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 SCYL1Q96KG9 808 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 SEMA3CQ99985 751 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 RC3H2Q9HBD1 1191 aaKnown RBP21.32■■□□□ 1
PTPN18-202ENST00000347849 SMPD4Q9NXE4 827 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 CDYLQ9Y232 598 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 KCTD3Q9Y597 815 aa21.32■■□□□ 1
PTPN18-202ENST00000347849 TSPAN3O60637 253 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 PRAMEF11O60813 436 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 STC2O76061 302 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 HOXD9P28356 352 aaPredicted RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 CSE1LP55060 971 aaKnown RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 LRRC26Q2I0M4 334 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 IL23RQ5VWK5 629 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 LIPMQ5VYY2 423 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 SETD3Q86TU7 594 aaPredicted RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 SLC41A1Q8IVJ1 513 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 TMEM102Q8N9M5 508 aaPredicted RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 EME1Q96AY2 570 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 TMEM169Q96HH4 297 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 SLC22A12Q96S37 553 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 GPR22Q99680 433 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 PDFQ9HBH1 243 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 TLK1Q9UKI8 766 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 ACOT8O14734 319 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 CORO1AP31146 461 aaKnown RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 HSPA13P48723 471 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 CSRP3P50461 194 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 SIRPB2Q5JXA9 342 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 KLC3Q6P597 504 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 FAM43BQ6ZT52 329 aaPredicted RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 SPATA6LQ8N4H0 392 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 TMEM151AQ8N4L1 468 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 DLG3Q92796 817 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 FATE1Q969F0 183 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 ATP6V1E2Q96A05 226 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 UNKQ9C0B0 810 aaKnown RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 ARNT2Q9HBZ2 717 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 ZBTB26Q9HCK0 441 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 ADA2Q9NZK5 511 aa21.31■■□□□ 1
PTPN18-202ENST00000347849 RUVBL2Q9Y230 463 aaKnown RBP21.31■■□□□ 1
PTPN18-202ENST00000347849 TRIM43BA6NCK2 446 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 TIMM44O43615 452 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 SBK3P0C264 359 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 SCNN1BP51168 640 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 PRKAA1Q13131 559 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ZYG11AQ6WRX3 759 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 PTAR1Q7Z6K3 402 aaPredicted RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 TMEM150AQ86TG1 271 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 CEP97Q8IW35 865 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 CEP70Q8NHQ1 597 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ITFG2Q969R8 447 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 TADA1Q96BN2 335 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 TRIM43Q96BQ3 446 aaPredicted RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 ZNF558Q96NG5 402 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 RHOJQ9H4E5 214 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 RHBDL2Q9NX52 303 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 TRMUO75648 421 aaKnown RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 CLTBP09497 229 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ATXN1LP0C7T5 689 aaKnown RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 PSMC3P17980 439 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 MAPKAPK2P49137 400 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 SERPINH1P50454 418 aaKnown RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 KPNA1P52294 538 aaPredicted RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 TWF1Q12792 350 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 BTG3Q14201 252 aaPredicted RBP21.3■■□□□ 1
PTPN18-202ENST00000347849 PTPRCAPQ14761 206 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 C5orf22Q49AR2 442 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ZNF470Q6ECI4 717 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 CNTN4Q8IWV2 1026 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 SPON2Q9BUD6 331 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ZNF385DQ9H6B1 395 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 CEPT1Q9Y6K0 416 aa21.3■■□□□ 1
PTPN18-202ENST00000347849 ZNF26P17031 533 aaPredicted RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 RGRP47804 291 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 ARSDP51689 593 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 GNA12Q03113 381 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 USP10Q14694 798 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 RNF135Q8IUD6 432 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 OR13J1Q8NGT2 312 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 PAWRQ96IZ0 340 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 PHF12Q96QT6 1004 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 DNAAF2Q9NVR5 837 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 TRPM5Q9NZQ8 1165 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 AGO1Q9UL18 857 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 COPG1Q9Y678 874 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 C7orf72A4D263 438 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 TCAF2A6NFQ2 919 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 CSPG5O95196 566 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 PIRTP0C851 137 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms