RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATP5F1P24539 256 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 HOXD9P28356 352 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TBX4P57082 545 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RPS24P62847 133 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PDAP1Q13442 181 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PFKFB4Q16877 469 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 BRMS1LQ5PSV4 323 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PAQR3Q6TCH7 311 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PRSS55Q6UWB4 352 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 EPHX4Q8IUS5 362 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MYO1HQ8N1T3 1032 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SCML4Q8N228 414 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 GALNT15Q8N3T1 639 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ZFP28Q8NHY6 868 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 VPS33AQ96AX1 596 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TRIB3Q96RU7 358 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RANBP9Q96S59 729 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 KATNAL1Q9BW62 490 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RBM38Q9H0Z9 239 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NOL11Q9H8H0 719 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM248Q9NWD8 314 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MARCH5Q9NX47 278 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 HSFX1Q9UBD0 423 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 IQCA1LA6NCM1 817 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 WASH4PA8MWX3 477 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PIP5K1BO14986 540 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MTSS1O43312 755 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NPHS1O60500 1241 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TIPRLO75663 272 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ANXA9O76027 345 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MT-ND1P03886 318 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 LTA4HP09960 611 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 IL12AP29459 219 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 GEMP55040 296 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CDH15P55291 814 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 DNAJB13P59910 316 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 POU4F1Q01851 419 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MED21Q13503 144 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 FASTKQ14296 549 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 GSTA3Q16772 222 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NADK2Q4G0N4 442 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MARC1Q5VT66 337 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PSAPL1Q6NUJ1 521 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TMCO2Q7Z6W1 182 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SPATA24Q86W54 205 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NUP93Q8N1F7 819 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RDH11Q8TC12 318 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TRPC4APQ8TEL6 797 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CANT1Q8WVQ1 401 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PRICKLE1Q96MT3 831 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ATOH8Q96SQ7 321 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CIB1Q99828 191 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 UBE2OQ9C0C9 1292 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PIF1Q9H611 641 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SCML2Q9UQR0 700 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 LZTS1Q9Y250 596 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ANAPC1Q9H1A4 1944 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 KRT87PA6NCN2 255 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 H3BSA7 217 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 DENRO43583 198 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CAPN15O75808 1086 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RSL1D1O76021 490 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 OAZ2O95190 189 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MTHFD1P11586 935 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NCK1P16333 377 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 IMPDH1P20839 514 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 FDXRP22570 491 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ME2P23368 584 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RAB27AP51159 221 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SEMG2Q02383 582 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 DUSP4Q13115 394 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SERINC3Q13530 473 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PAGE3Q5JUK9 113 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ANKRD34AQ69YU3 496 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 LINGO4Q6UY18 593 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF354CQ86Y25 554 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TTC30BQ8N4P2 665 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RIN3Q8TB24 985 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 DIS3LQ8TF46 1054 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NCSTNQ92542 709 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 VOPP1Q96AW1 172 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 C1orf74Q96LT6 269 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 BIRC8Q96P09 236 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CCDC28BQ9BUN5 200 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 GRIP2Q9C0E4 1043 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 RNF38Q9H0F5 515 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 UPF3AQ9H1J1 476 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CATSPERBQ9H7T0 1116 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 MRM3Q9HC36 420 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CMTM6Q9NX76 183 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM181Q9P2C4 612 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 VPS28Q9UK41 221 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NEUROG3Q9Y4Z2 214 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 PCDHGC4Q9Y5F7 938 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ARHGAP10A1A4S6 786 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 GOLGA8CPA6NN73 597 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms