RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 CAPN8A6NHC0 703 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 E7ENX8 843 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PSMD12O00232 456 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 BCAS2O75934 225 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 CDK14O94921 469 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ALDOCP09972 364 aaKnown RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 UQCRBP14927 111 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 CR2P20023 1033 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 CDKN1CP49918 316 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 SQLEQ14534 574 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 TYSND1Q2T9J0 566 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ACBD5Q5T8D3 534 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 FBXL19Q6PCT2 694 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PAOXQ6QHF9 649 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 OR4K2Q8NGD2 314 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 WBP2Q969T9 261 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 TRMOQ9BU70 441 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 COMMD8Q9NX08 183 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 CACNA2D2Q9NY47 1150 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 GIMAP2Q9UG22 337 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 DNAJC15Q9Y5T4 150 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ANKRD12Q6UB98 2062 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 COCHO43405 550 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 VCLP18206 1134 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PSME3P61289 254 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 GRAMD1BQ3KR37 738 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 FBXO48Q5FWF7 155 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 REP15Q6BDI9 236 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 MRPL1Q9BYD6 325 aaKnown RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 NLE1Q9NVX2 485 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 GALPQ9UBC7 116 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 RIMS3Q9UJD0 308 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 A0A0U1RQS6 177 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 ZNF840PA6NDX5 716 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 TBKBP1A7MCY6 615 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PEX1O43933 1283 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 OGNP20774 298 aaKnown RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 CDH4P55283 916 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PDAP1Q13442 181 aaKnown RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PFKFB4Q16877 469 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PAQR3Q6TCH7 311 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 FUNDC1Q8IVP5 155 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 RAET1EQ8TD07 263 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 ZNF512Q96ME7 567 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 KCNA7Q96RP8 456 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 CYP2S1Q96SQ9 504 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 PCDHAC1Q9H158 963 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 COPS7BQ9H9Q2 264 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 UTP6Q9NYH9 597 aaKnown RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 ADA2Q9NZK5 511 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 C6orf203Q9P0P8 240 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 UBA2Q9UBT2 640 aaPredicted RBP15.42■□□□□ 0.06
UPF3B-202ENST00000345865 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 RIMKLBQ9ULI2 386 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 FAM50BQ9Y247 325 aa15.42■□□□□ 0.06
UPF3B-202ENST00000345865 UBA6A0AVT1 1052 aaPredicted RBP15.41■□□□□ 0.06
UPF3B-202ENST00000345865 H7C4K7 107 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 KDELR3O43731 214 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 SMIM24O75264 130 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 GPC4O75487 556 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 F11P03951 625 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 INHAP05111 366 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 PMLP29590 882 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 FMO4P31512 558 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 OR1D2P34982 312 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 XIAPP98170 497 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 SMARCB1Q12824 385 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 CYTH1Q15438 398 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 AFAP1L2Q8N4X5 818 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 LPGAT1Q92604 370 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 RMDN1Q96DB5 314 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 C19orf60Q96EN9 201 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 GCNAQ96QF7 691 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
UPF3B-202ENST00000345865 VN1R3Q9BXE9 311 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 VCX3BQ9H321 246 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 AKTIPQ9H8T0 292 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 LRFN2Q9ULH4 789 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 PCDHGC4Q9Y5F7 938 aa15.41■□□□□ 0.06
UPF3B-202ENST00000345865 INSIG1O15503 277 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 STC2O76061 302 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 SEC24AO95486 1093 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 HMGA1P17096 107 aaKnown RBP15.4■□□□□ 0.06
UPF3B-202ENST00000345865 OXCT1P55809 520 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 NPAS4Q8IUM7 802 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 SLC30A3Q99726 388 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 NACA2Q9H009 215 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 RNF38Q9H0F5 515 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 TUBB1Q9H4B7 451 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 MID1IP1Q9NPA3 183 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 SARDHQ9UL12 918 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 DTNAQ9Y4J8 743 aa15.4■□□□□ 0.06
UPF3B-202ENST00000345865 PRSS51A0A1B0GVH4 220 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms