RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TRIP6Q15654 476 aaKnown RBP13.83□□□□□ -0.2
TPM4-202ENST00000344824 IQCHQ86VS3 1027 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 OXR1Q8N573 874 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 FATE1Q969F0 183 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 C1QTNF7Q9BXJ2 289 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 GBA3Q9H227 469 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 GRHL1Q9NZI5 618 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 UBP1Q9NZI7 540 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 ANAPC5Q9UJX4 755 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 NFU1Q9UMS0 254 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 PCDHGC4Q9Y5F7 938 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 LRP4O75096 1905 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 TCRBV7S3A2A0A539 114 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 TSPAN11A1L157 253 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 GOLGA8MH3BSY2 632 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 DFNA5O60443 496 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 C6P13671 934 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 FDFT1P37268 417 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 MMP12P39900 470 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 GRK6P43250 576 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 DSC2Q02487 901 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM4-202ENST00000344824 BNIP3Q12983 259 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 PDE1CQ14123 709 aaPredicted RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 PARP6Q2NL67 630 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 ZNF542PQ5EBM4 170 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 ANKRD22Q5VYY1 191 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 C4orf22Q6V702 233 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 KYAT3Q6YP21 454 aaKnown RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 Q6ZSR6 202 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 DENND6BQ8NEG7 585 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 CPT1BQ92523 772 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM4-202ENST00000344824 SEMA3CQ99985 751 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 MGME1Q9BQP7 344 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 NOD2Q9HC29 1040 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 WHRNQ9P202 907 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 PCDHGB2Q9Y5G2 931 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 ARID1BQ8NFD5 2236 aaPredicted RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 TPRP12270 2363 aaKnown RBP13.82□□□□□ -0.2
TPM4-202ENST00000344824 PTPRBP23467 1997 aa13.82□□□□□ -0.2
TPM4-202ENST00000344824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 BHMG1C9JSJ3 638 aaPredicted RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 YKT6O15498 198 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 MT-CYBP00156 380 aaPredicted RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 PCCBP05166 539 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 APRTP07741 180 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 ELFN1P0C7U0 828 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 FTH1P19P0C7X4 201 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 MYBL2P10244 700 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SPINK2P20155 84 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 IGFALSP35858 605 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 LIG3P49916 1009 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SUOXP51687 545 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 THOP1P52888 689 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 TRAF2Q12933 501 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 CUL1Q13616 776 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 PRPSAP1Q14558 356 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 IRF4Q15306 451 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 TMEM52BQ4KMG9 183 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 RNASEH2BQ5TBB1 312 aaKnown RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 ABI3BPQ7Z7G0 1075 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SLC22A18ASQ8N1D0 253 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SEC14L1Q92503 715 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 BMFQ96LC9 184 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 GORASP1Q9BQQ3 440 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 HAUS2Q9NVX0 235 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 DNAJC28Q9NX36 388 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 FTSJ1Q9UET6 329 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 COL5A1P20908 1838 aaPredicted RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 TMEM63AO94886 807 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 CR2P20023 1033 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 CD86P42081 329 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 RABIFP47224 123 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 POLR2LP62875 67 aaKnown RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 OLIG2Q13516 323 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SEMA5AQ13591 1074 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 KCNJ11Q14654 390 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 SHBQ15464 509 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 PCSK7Q16549 785 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 HIBCHQ6NVY1 386 aaPredicted RBP13.81□□□□□ -0.2
TPM4-202ENST00000344824 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
TPM4-202ENST00000344824 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms