RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 HOXA2O43364 376 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 FGF1P05230 155 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 ZNF12P17014 697 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 IL12AP29459 219 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 PIK3CGP48736 1102 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 IRF9Q00978 393 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 IL27RAQ6UWB1 636 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 TMEM192Q8IY95 271 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 ZNF540Q8NDQ6 660 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 NDRG1Q92597 394 aaKnown RBP10.9□□□□□ -0.67
RPL28-201ENST00000344063 UROC1Q96N76 676 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 DPEP3Q9H4B8 488 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 GOLGA2P5Q9HBQ8 144 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 GIT1Q9Y2X7 761 aa10.9□□□□□ -0.67
RPL28-201ENST00000344063 A0A0J9YYE9 177 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CPSF4O95639 269 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 IDH2P48735 452 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 C11orf91Q3C1V1 193 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CANT1Q8WVQ1 401 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 TRMT13Q9NUP7 481 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 ZMYM5Q9UJ78 669 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CNTN6Q9UQ52 1028 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 TUBGCP6Q96RT7 1819 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CNTNAP1P78357 1384 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PSMD11O00231 422 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 NPHS1O60500 1241 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CCNKO75909 580 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 GUCA1CO95843 209 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 IL12RB1P42701 662 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PRIM2P49643 509 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 FCGRTP55899 365 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CCNIQ14094 377 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 FAM187BQ17R55 369 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TXNDC11Q6PKC3 985 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SLC44A2Q8IWA5 706 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 OTUB1Q96FW1 271 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 PGLYRP2Q96PD5 576 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 MARCH7Q9H992 704 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TMEM233B4DJY2 109 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 EI24O14681 340 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SEC22BO75396 215 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PAGE1O75459 146 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 LRIG2O94898 1065 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ITGB6P18564 788 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 BEX3Q00994 111 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 DDR2Q16832 855 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PDCD4Q53EL6 469 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 NOL9Q5SY16 702 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 AFTPHQ6ULP2 937 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 OTOP3Q7RTS5 596 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ADHFE1Q8IWW8 467 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 FSTL5Q8N475 847 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 CARNMT1Q8N4J0 409 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TEKT5Q96M29 485 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 GMLQ99445 158 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ASB3Q9Y575 518 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CACNA1SQ13698 1873 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 NEMP2A6NFY4 417 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 CLDN25C9JDP6 229 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ALDH2P05091 517 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 MMP3P08254 477 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 MBL2P11226 248 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 PPP3CCP48454 512 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ALDH7A1P49419 539 aaKnown RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 SPDYE7PQ495Y7 208 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 REP15Q6BDI9 236 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SIGLEC10Q96LC7 697 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ADAM2Q99965 735 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TMEM245Q9H330 911 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 FAM105AQ9NUU6 356 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 SMPD3Q9NY59 655 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 UXTQ9UBK9 157 aaPredicted RBP10.89□□□□□ -0.67
RPL28-201ENST00000344063 SPASTQ9UBP0 616 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 WDR37Q9Y2I8 494 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 TCAF1Q9Y4C2 921 aa10.89□□□□□ -0.67
RPL28-201ENST00000344063 ZNF487B1APH4 448 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 CST1P01037 141 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 ZNF182P17025 639 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 CCR10P46092 362 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 RPS9P46781 194 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 TTPAP49638 278 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 DAOAP59103 153 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 LILRA4P59901 499 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 MAXP61244 160 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 NRG1Q02297 640 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms