RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 N4BP2L2Q92802 583 aaPredicted RBP18.6■□□□□ 0.57
HOXA9-201ENST00000343483 ZNF570Q96NI8 536 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 CDH19Q9H159 772 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 PLA2G4CQ9UP65 541 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 CCL26Q9Y258 94 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 FNDC3AQ9Y2H6 1198 aaKnown RBP18.6■□□□□ 0.57
HOXA9-201ENST00000343483 PCDHB9Q9Y5E1 797 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 IRAK3Q9Y616 596 aa18.6■□□□□ 0.57
HOXA9-201ENST00000343483 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.6■□□□□ 0.57
HOXA9-201ENST00000343483 OGNP20774 298 aaKnown RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 LPOP22079 712 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 CLCN4P51793 760 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 EPHB1P54762 984 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 LMAN2Q12907 356 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 GPR158Q5T848 1215 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 ZNF549Q6P9A3 640 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 PSRC1Q6PGN9 363 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 AFTPHQ6ULP2 937 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 CCNYL1Q8N7R7 359 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 SH3RF2Q8TEC5 729 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 DRC3Q9H069 523 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 ILKAPQ9H0C8 392 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 POLR3BQ9NW08 1133 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 DNMT3BQ9UBC3 853 aaKnown RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 MTF2Q9Y483 593 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 A0A0U1RQS6 177 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 SMAD6O43541 496 aaKnown RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 MPSTP25325 297 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 RCN1Q15293 331 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 ARL13AQ5H913 290 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 MPP7Q5T2T1 576 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 SCUBE1Q8IWY4 988 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 TXNDC5Q8NBS9 432 aaKnown RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 SP7Q8TDD2 431 aaPredicted RBP18.59■□□□□ 0.57
HOXA9-201ENST00000343483 STMN2Q93045 179 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 FAM136AQ96C01 138 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 TCEAL4Q96EI5 215 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 UBXN10Q96LJ8 280 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 COG4Q9H9E3 785 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 BPIFA1Q9NP55 256 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 TLR9Q9NR96 1032 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 CHD7Q9P2D1 2997 aa18.59■□□□□ 0.57
HOXA9-201ENST00000343483 UBA6A0AVT1 1052 aaPredicted RBP18.58■□□□□ 0.57
HOXA9-201ENST00000343483 NEMP2A6NFY4 417 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 MEI4A8MW99 385 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 KRT36O76013 467 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 CD70P32970 193 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 PTDSS1P48651 473 aaKnown RBP18.58■□□□□ 0.57
HOXA9-201ENST00000343483 ASPHQ12797 758 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 CCDC6Q16204 474 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 TYSND1Q2T9J0 566 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 TECRLQ5HYJ1 363 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 TMEM207Q6UWW9 146 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.58■□□□□ 0.57
HOXA9-201ENST00000343483 SHKBP1Q8TBC3 707 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 ANKRD27Q96NW4 1050 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 THTPAQ9BU02 230 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 SHCBP1LQ9BZQ2 653 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 C1orf21Q9H246 121 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 POMKQ9H5K3 350 aa18.58■□□□□ 0.57
HOXA9-201ENST00000343483 KIAA1522Q9P206 1035 aaPredicted RBP18.58■□□□□ 0.57
HOXA9-201ENST00000343483 TM7SF2O76062 418 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 PIGNO95427 931 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 PSMG1O95456 288 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 CYBBP04839 570 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 NCF2P19878 526 aaPredicted RBP18.58■□□□□ 0.56
HOXA9-201ENST00000343483 FDXRP22570 491 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 ATP5F1P24539 256 aaPredicted RBP18.58■□□□□ 0.56
HOXA9-201ENST00000343483 AP1S1P61966 158 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 TAF11Q15544 211 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 CAMK1DQ8IU85 385 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 CMTM8Q8IZV2 173 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 PAF1Q8N7H5 531 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 ACDQ96AP0 544 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 MAN1C1Q9NR34 630 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 FKBPLQ9UIM3 349 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 CORO1CQ9ULV4 474 aaPredicted RBP18.58■□□□□ 0.56
HOXA9-201ENST00000343483 ARHGAP26Q9UNA1 814 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 RAP2CQ9Y3L5 183 aa18.58■□□□□ 0.56
HOXA9-201ENST00000343483 STX7O15400 261 aaKnown RBP18.57■□□□□ 0.56
HOXA9-201ENST00000343483 CIB2O75838 187 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 RBP1P09455 135 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 SESN3P58005 492 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 ILF2Q12905 390 aaKnown RBP18.57■□□□□ 0.56
HOXA9-201ENST00000343483 ACAP2Q15057 778 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 TEAD2Q15562 447 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 EPGNQ6UW88 154 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 SPRED2Q7Z698 418 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 ULK2Q8IYT8 1036 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 POU5F2Q8N7G0 328 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 FIBINQ8TAL6 211 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 SPPL3Q8TCT6 385 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 MYO19Q96H55 970 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 CLPTM1LQ96KA5 538 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 C17orf80Q9BSJ5 609 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 CYP4F12Q9HCS2 524 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 INTS10Q9NVR2 710 aaKnown RBP18.57■□□□□ 0.56
HOXA9-201ENST00000343483 STOML1Q9UBI4 398 aa18.57■□□□□ 0.56
HOXA9-201ENST00000343483 CHD9Q3L8U1 2897 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms