RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RAD51AP1Q96B01 352 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 NMD3Q96D46 503 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 ACBD6Q9BR61 282 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 RAP2CQ9Y3L5 183 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 CPQQ9Y646 472 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 HNRNPLP14866 589 aaKnown RBP eCLIP15□□□□□ -0.012e-7■■□□□ 13.7
UBE3B-202ENST00000342494 UGT2B15P54855 530 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 GAD2Q05329 585 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 LPIN1Q14693 890 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 TIMM50Q3ZCQ8 353 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 TEX44Q53QW1 395 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 DDI2Q5TDH0 399 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 HIST2H2ABQ8IUE6 130 aaPredicted RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 KREMEN2Q8NCW0 462 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 DBF4BQ8NFT6 615 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 NIFKQ9BYG3 293 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 NMUR1Q9HB89 426 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 ZDHHC4Q9NPG8 344 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 TRMT13Q9NUP7 481 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 FAM237BA0A1B0GVD1 139 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 ABHD14A-ACY1A0A1B0GW23 586 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 MASP1P48740 699 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 SP2Q02086 613 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 DEF8Q6ZN54 512 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 APLFQ8IW19 511 aaPredicted RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 DQX1Q8TE96 717 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 AENQ8WTP8 325 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 SNRNP27Q8WVK2 155 aaKnown RBP15□□□□□ -0.01
UBE3B-202ENST00000342494 OR52E6Q96RD3 313 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 BRINP2Q9C0B6 783 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 ARHGEF4Q9NR80 690 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 CLN6Q9NWW5 311 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 IQGAP1P46940 1657 aa15□□□□□ -0.01
UBE3B-202ENST00000342494 A0A1B0GVM2 712 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TCAF2A6NFQ2 919 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 H3BQF6 201 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 EPHB6O15197 1021 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 MAPKAPK2P49137 400 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TRAF3Q13114 568 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CCDC92Q53HC0 331 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 VARS2Q5ST30 1063 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CERCAMQ5T4B2 595 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ZCCHC7Q8N3Z6 543 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 NDRG1Q92597 394 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 Q96MT0 163 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 FAM83DQ9H4H8 585 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PAIP2BQ9ULR5 123 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 FGFR3P22607 806 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 DGKGP49619 791 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CDH4P55283 916 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TNS4Q8IZW8 715 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TCAIMQ8N3R3 496 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 MAGEE2Q8TD90 523 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 LMLNQ96KR4 655 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CSPG4P5Q96PW8 444 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SORCS3Q9UPU3 1222 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TSC22D4Q9Y3Q8 395 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PCDHGB3Q9Y5G1 929 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 KLRG2A4D1S0 409 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 AP5Z1O43299 807 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 NDST3O95803 873 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 EOMESO95936 686 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ECM1Q16610 540 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 KLHL24Q6TFL4 600 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 C5orf34Q96MH7 638 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ZFP37Q9Y6Q3 630 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 NPEPPSL1A6NEC2 478 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 HDAC3O15379 428 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ABHD2P08910 425 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ALPPL2P10696 532 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PKMP14618 531 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SLC6A2P23975 617 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 RCVRNP35243 200 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SEMA5AQ13591 1074 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ZSWIM7Q19AV6 140 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SPANXN2Q5MJ10 180 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ARCQ7LC44 396 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 HEATR4Q86WZ0 1026 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PRELID2Q8N945 189 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ADAMTS15Q8TE58 950 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CPXM1Q96SM3 734 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 SPAG4Q9NPE6 437 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ATP6AP2A0A1C7CYW4 349 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ATP6AP2O75787 350 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 TNFAIP8O95379 198 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 RPL17P18621 184 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PPIBP23284 216 aaKnown RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 USP46P62068 366 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 FPGSQ05932 587 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 LGALS3BPQ08380 585 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 MINDY4Q4G0A6 757 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 ENKURQ8TC29 256 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 MAF1Q9H063 256 aa14.99□□□□□ -0.01
UBE3B-202ENST00000342494 CLEC4MQ9H2X3 399 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-202ENST00000342494 PNMA8CA0A1B0GUJ8 204 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 POP4O95707 220 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 PSME3P61289 254 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 SPESP1Q6UW49 350 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 ZBTB2Q8N680 514 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms