RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 FRMD6Q96NE9 622 aa7.46□□□□□ -1.21
LMO7-202ENST00000341547 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.21
LMO7-202ENST00000341547 CHIAQ9BZP6 476 aa7.46□□□□□ -1.21
LMO7-202ENST00000341547 SALL4Q9UJQ4 1053 aa7.46□□□□□ -1.21
LMO7-202ENST00000341547 PDE10AQ9Y233 779 aa7.46□□□□□ -1.21
LMO7-202ENST00000341547 LRIG2O94898 1065 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 MAPK9P45984 424 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RPL38P63173 70 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 TMEM132BQ14DG7 1078 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 ACAP2Q15057 778 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SMU1Q2TAY7 513 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PCID2Q5JVF3 399 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 HYIQ5T013 277 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PPP1R26Q5T8A7 1209 aaPredicted RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 TRPV1Q8NER1 839 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 TOP1MTQ969P6 601 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 OR52E6Q96RD3 313 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 NODALQ96S42 347 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CNOT6Q9ULM6 557 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 CABYRO75952 493 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 NCK1P16333 377 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 HOXD10P28358 340 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CLCN5P51795 746 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 HSPA14Q0VDF9 509 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 ACOX1Q15067 660 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 C11orf91Q3C1V1 193 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 FAM171BQ6P995 826 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CACUL1Q86Y37 369 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CCDC28AQ8IWP9 274 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 REPS1Q96D71 796 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PANX3Q96QZ0 392 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 MED28Q9H204 178 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 KAT8Q9H7Z6 458 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 CAB39LQ9H9S4 337 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 EMC3Q9P0I2 261 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SLC7A8Q9UHI5 535 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 GPR75-ASB3A0A0A6YYF3 556 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 ILVBLA1L0T0 632 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SMIM22K7EJ46 135 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RFXANKO14593 260 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 AP3D1O14617 1153 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 NOL4O94818 638 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 POMCP01189 267 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 OR56A5P0C7T3 313 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 NR2F1P10589 423 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RPL4P36578 427 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 ZNF135P52742 658 aaPredicted RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 MYBPC1Q00872 1141 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
LMO7-202ENST00000341547 CTBP1Q13363 440 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CBFBQ13951 182 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 FBXO47Q5MNV8 452 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CXorf57Q6NSI4 855 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 XKRXQ6PP77 449 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PTGR2Q8N8N7 351 aaPredicted RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 STAG3L4Q8TBR4 150 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 CLIP3Q96DZ5 547 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SPACA7Q96KW9 195 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 ACAT2Q9BWD1 397 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 ALG2Q9H553 416 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 FAIMQ9NVQ4 179 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 MTA2O94776 668 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 MLYCDO95822 493 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RPN2P04844 631 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SLC6A2P23975 617 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 UGT2B15P54855 530 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
LMO7-202ENST00000341547 FAM220AQ7Z4H9 259 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 GALNTL5Q7Z4T8 443 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 NETO2Q8NC67 525 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PMM1Q92871 262 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 PANX1Q96RD7 426 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 FDXACB1Q9BRP7 624 aaPredicted RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 WDR55Q9H6Y2 383 aaPredicted RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 TMLHEQ9NVH6 421 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SMPD4Q9NXE4 827 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 RBM7Q9Y580 266 aaKnown RBP7.46□□□□□ -1.22
LMO7-202ENST00000341547 ATRNO75882 1429 aa7.46□□□□□ -1.22
LMO7-202ENST00000341547 SPATA31D1Q6ZQQ2 1576 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 CCDC189A1A4V9 331 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 ANKRD63C9JTQ0 380 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 SUPT20HL2P0C7V6 817 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 PIK3CGP48736 1102 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 LHX1P48742 406 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 KCNK18Q7Z418 384 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 PPM1MQ96MI6 270 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 TRNT1Q96Q11 434 aaKnown RBP7.45□□□□□ -1.22
LMO7-202ENST00000341547 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
LMO7-202ENST00000341547 TLR8Q9NR97 1041 aaKnown RBP7.45□□□□□ -1.22
LMO7-202ENST00000341547 LRRC14BA6NHZ5 514 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 H0YGN5 161 aa7.45□□□□□ -1.22
LMO7-202ENST00000341547 FAM155BO75949 473 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms