RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RNF25Q96BH1 459 aaPredicted RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 SMIM14Q96QK8 99 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 TDRD1Q9BXT4 1180 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 ABCG8Q9H221 673 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 POLR1BQ9H9Y6 1135 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 PCDH9Q9HC56 1237 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 DDX56Q9NY93 547 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 RPL26L1Q9UNX3 145 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 WDFY3Q8IZQ1 3526 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 A0A0U1RQS6 177 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 PRSS38A1L453 326 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 PRLP01236 227 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 MPOP05164 745 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 CEACAM5P06731 702 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 COMTP21964 271 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 EIF2S3P41091 472 aaKnown RBP20.12■□□□□ 0.81
SYNE2-201ENST00000341472 GPR1P46091 355 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 CDK3Q00526 305 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 DPTQ07507 201 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 PPIDQ08752 370 aaKnown RBP20.12■□□□□ 0.81
SYNE2-201ENST00000341472 LRRC66Q68CR7 880 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 RAET1GQ6H3X3 334 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 RFX6Q8HWS3 928 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 TC2NQ8N9U0 490 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 GPR156Q8NFN8 814 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 AP2M1Q96CW1 435 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 DPEP2Q9H4A9 486 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 CARS2Q9HA77 564 aaKnown RBP20.12■□□□□ 0.81
SYNE2-201ENST00000341472 DNPEPQ9ULA0 475 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 HYOU1Q9Y4L1 999 aa20.12■□□□□ 0.81
SYNE2-201ENST00000341472 TP53BP1Q12888 1972 aaPredicted RBP20.12■□□□□ 0.81
SYNE2-201ENST00000341472 SPOPO43791 374 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 ZNF30P17039 623 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 CD86P42081 329 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 STC1P52823 247 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 GABREP78334 506 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 IFI35P80217 286 aaPredicted RBP20.11■□□□□ 0.81
SYNE2-201ENST00000341472 AP1B1Q10567 949 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 TBC1D25Q3MII6 688 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 NRSN1Q8IZ57 195 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 CNTD1Q8N815 330 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 LPCAT1Q8NF37 534 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 CCL4L1Q8NHW4 92 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 SNIP1Q8TAD8 396 aaKnown RBP20.11■□□□□ 0.81
SYNE2-201ENST00000341472 CCDC74AQ96AQ1 378 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 ZNF578Q96N58 590 aaPredicted RBP20.11■□□□□ 0.81
SYNE2-201ENST00000341472 FRMD8Q9BZ67 464 aaPredicted RBP20.11■□□□□ 0.81
SYNE2-201ENST00000341472 BRD8Q9H0E9 1235 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 SUDS3Q9H7L9 328 aaPredicted RBP20.11■□□□□ 0.81
SYNE2-201ENST00000341472 SYNDIG1Q9H7V2 258 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 CD84Q9UIB8 345 aa20.11■□□□□ 0.81
SYNE2-201ENST00000341472 ASXL3Q9C0F0 2248 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 LAMA5O15230 3695 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 FUCA1P04066 466 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 POLD2P49005 469 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 SPIDRQ14159 915 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 SPA17Q15506 151 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 ADAMTSL4Q6UY14 1074 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 ZNF765Q7L2R6 523 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 PDZD3Q86UT5 571 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 GPBAR1Q8TDU6 330 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 SCAMP4Q969E2 229 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 ATXN7L3BQ96GX2 97 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 GSDMCQ9BYG8 508 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 TRNAU1APQ9NX07 287 aaKnown RBP20.1■□□□□ 0.81
SYNE2-201ENST00000341472 SLC17A4Q9Y2C5 497 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 PCDHA13Q9Y5I0 950 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 ENTPD2Q9Y5L3 495 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 ALG6Q9Y672 507 aa20.1■□□□□ 0.81
SYNE2-201ENST00000341472 CAPN8A6NHC0 703 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 ANKRD66B4E2M5 251 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 NTN3O00634 580 aaPredicted RBP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 PPP1R12AO14974 1030 aaPredicted RBP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 CLDN7O95471 211 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 PYGLP06737 847 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 MMP2P08253 660 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 GLB1P16278 677 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 GNPDA1P46926 289 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 DYNLT1P63172 113 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 CCL7P80098 99 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 SKOR1P84550 965 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 ILF3Q12906 894 aaKnown RBP eCLIP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 TFDP2Q14188 446 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 QPCTQ16769 361 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 MFSD7Q6UXD7 560 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 NPNTQ6UXI9 565 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 BZW1Q7L1Q6 419 aaKnown RBP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 RAVER1Q8IY67 606 aaKnown RBP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 CCDC170Q8IYT3 715 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 AGAP3Q96P47 875 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 LYSMD1Q96S90 227 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 MLPHQ9BV36 600 aaPredicted RBP20.09■□□□□ 0.81
SYNE2-201ENST00000341472 ADGRE3Q9BY15 652 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 RABGEF1Q9UJ41 708 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 SUFUQ9UMX1 484 aa20.09■□□□□ 0.81
SYNE2-201ENST00000341472 CACNA1GO43497 2377 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 B4DGG1 531 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 TMX2-CTNND1H3BSU7 103 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 CASC3O15234 703 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 NOBOXO60393 691 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms