RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 PMF1Q6P1K2 205 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 CTU1Q7Z7A3 348 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 SLC26A11Q86WA9 606 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 HID1Q8IV36 788 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PPIL6Q8IXY8 311 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 ADGRF2Q8IZF7 708 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 FEZF2Q8TBJ5 459 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 ZFYVE19Q96K21 471 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 C17orf62Q9BQA9 187 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 MCMBPQ9BTE3 642 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 DDX28Q9NUL7 540 aaKnown RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 MAT2BQ9NZL9 334 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 TMEM216Q9P0N5 145 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 IFT80Q9P2H3 777 aaPredicted RBP11.87□□□□□ -0.51
RTN3-203ENST00000341307 COPG2Q9UBF2 871 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 PMF1-BGLAPU3KQ54 211 aa11.87□□□□□ -0.51
RTN3-203ENST00000341307 SAC3D1A6NKF1 404 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CXorf49A8MYA2 514 aaPredicted RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 KBTBD13C9JR72 458 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 F8VP50 259 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 PI4K2BG5E9Z4 385 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 NRP1O14786 923 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 PPEF2O14830 753 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 B4GAT1O43505 415 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 GPR32O75388 356 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 F2P00734 622 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 GSNP06396 782 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 MYL3P08590 195 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TSHRP16473 764 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ELK3P41970 407 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 NUMBP49757 651 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ILF2Q12905 390 aaKnown RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 SLC9B1Q4ZJI4 515 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 IGSF11Q5DX21 431 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ZNF773Q6PK81 442 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CRTC3Q6UUV7 619 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 EPHX4Q8IUS5 362 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 KATNAL2Q8IYT4 538 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CBR4Q8N4T8 237 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 OR6Q1Q8NGQ2 317 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CCDC120Q96HB5 630 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 FUNDC2Q9BWH2 189 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ELOVL4Q9GZR5 314 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 PCDHAC1Q9H158 963 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 MRPL47Q9HD33 250 aaKnown RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 CHST12Q9NRB3 414 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 PAQR5Q9NXK6 330 aaPredicted RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 DRG1Q9Y295 367 aaKnown RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 PCDHGA7Q9Y5G6 932 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TEX51A0A1B0GUA7 166 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 RGSL1A5PLK6 1076 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TREHO43280 583 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TIPRLO75663 272 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 VAPBO95292 243 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 NDST3O95803 873 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 CRHR1P34998 444 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 GRIK1P39086 918 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 EIF2DP41214 584 aaKnown RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 MFSD10Q14728 455 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 AGAP6Q5VW22 663 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 METTL2BQ6P1Q9 378 aaKnown RBP11.86□□□□□ -0.51
RTN3-203ENST00000341307 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 IL17RDQ8NFM7 739 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 OR2T34Q8NGX1 318 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ASB9Q96DX5 294 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 AGAP4Q96P64 663 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ZSCAN5AQ9BUG6 496 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 ABCB10Q9NRK6 738 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 IGSF5Q9NSI5 407 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 DPP3Q9NY33 737 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 NUP50Q9UKX7 468 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
RTN3-203ENST00000341307 RANBP2P49792 3224 aaKnown RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 PSTPIP1O43586 416 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 EPN2O95208 641 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 BMP2P12643 396 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 ATF4P18848 351 aaPredicted RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 GLDCP23378 1020 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 AKAP5P24588 427 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 SLC7A1P30825 629 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms