RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FBXO8Q9NRD0 319 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 UBA2Q9UBT2 640 aaPredicted RBP16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 RPS6KL1Q9Y6S9 549 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 TTLL8A6PVC2 850 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 DNAJB5O75953 348 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 CLDN1O95832 211 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 EML2O95834 649 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 ZNF28P17035 718 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 NOMO3P69849 1222 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 PAK1Q13153 545 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 GRM3Q14832 879 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 SRLQ86TD4 932 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 NOP9Q86U38 636 aaKnown RBP16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 DPYSL5Q9BPU6 564 aa16.33■□□□□ 0.2
NECTIN1-202ENST00000340882 C2CD4BA6NLJ0 364 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 PDE2AO00408 941 aaPredicted RBP16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 MMEP08473 750 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 EPHB2P29323 1055 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 ACTR1BP42025 376 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 YBEYP58557 167 aaPredicted RBP16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 ACTR1AP61163 376 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 GPLD1P80108 840 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 EFCAB3Q8N7B9 438 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC37A2Q8TED4 501 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 NUS1Q96E22 293 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 TIGD1Q96MW7 591 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 PHPT1Q9NRX4 125 aaPredicted RBP16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 B4GALT6Q9UBX8 382 aa16.32■□□□□ 0.2
NECTIN1-202ENST00000340882 TTC24A2A3L6 582 aaPredicted RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 GTPBP10A4D1E9 387 aaKnown RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 TRAFD1O14545 582 aaPredicted RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 SDC4P31431 198 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 DLSTP36957 453 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 CDK3Q00526 305 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 PTPRRQ15256 657 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 CNGA3Q16281 694 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 PARP15Q460N3 678 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 NADK2Q4G0N4 442 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 UMODL1-AS1Q8N2C9 162 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 FNIP1Q8TF40 1166 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 FAM172AQ8WUF8 416 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 AHCYL2Q96HN2 611 aaKnown RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 TRIT1Q9H3H1 467 aaKnown RBP16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 LRRC19Q9H756 370 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 CASS4Q9NQ75 786 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 CROTQ9UKG9 612 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC17A4Q9Y2C5 497 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 MAP4K5Q9Y4K4 846 aa16.31■□□□□ 0.2
NECTIN1-202ENST00000340882 WASH4PA8MWX3 477 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 CREB3O43889 395 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 PRAMEF11O60813 436 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 RFPL1O75677 317 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 SERPINA4P29622 427 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 ETV3P41162 512 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 PTPN9P43378 593 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 FASLGP48023 281 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 PPM1FP49593 454 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 BPIFB4P59827 614 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 MRPL49Q13405 166 aaKnown RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 PRR30Q53SZ7 412 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 DENND2CQ68D51 928 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 DOK6Q6PKX4 331 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 WDR74Q6RFH5 385 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 ESX1Q8N693 406 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 NCSTNQ92542 709 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 NTAN1Q96AB6 310 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC38A3Q99624 504 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 ZPBPQ9BS86 351 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 CUEDC1Q9NWM3 386 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 SIDT1Q9NXL6 827 aaKnown RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 POLHQ9Y253 713 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 PCYT1BQ9Y5K3 369 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 FHOD1Q9Y613 1164 aa16.3■□□□□ 0.2
NECTIN1-202ENST00000340882 A0A0U1RQS6 177 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 CDC14CA4D256 554 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 POLR1CO15160 346 aaPredicted RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 KRT38O76015 456 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 MAP3K6O95382 1288 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 LSM8O95777 96 aaKnown RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 IVLP07476 585 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 TNFAIP3P21580 790 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 CSNK1DP48730 415 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 PMS2P54278 862 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 BCL2L1Q07817 233 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms