RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CCNIQ14094 377 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 NANOGP8Q6NSW7 305 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 NDUFAF2Q8N183 169 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 PPP1R14CQ8TAE6 165 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 GABPB2Q8TAK5 448 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 PLEKHA8Q96JA3 519 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 BTN2A3PQ96KV6 586 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 NOL6Q9H6R4 1146 aaKnown RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 XAB2Q9HCS7 855 aaKnown RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 OLA1Q9NTK5 396 aaKnown RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 EBF1Q9UH73 591 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 ZNF487B1APH4 448 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 USP12O75317 370 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 RFPL1O75677 317 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 KRT34O76011 436 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 IL1BP01584 269 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 IGLV3-27P01718 113 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 PROCP04070 461 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 HDCP19113 662 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 PPARGP37231 505 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 NR1H2P55055 460 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 GPM6BQ13491 265 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 SPIDRQ14159 915 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 C16orf46Q6P387 395 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 ZNF683Q8IZ20 524 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 ZNF567Q8N184 647 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 ATP6V0D2Q8N8Y2 350 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 CGREF1Q99674 301 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 KLHL25Q9H0H3 589 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 HCFC2Q9Y5Z7 792 aa15.13■□□□□ 0.01
BRAT1-201ENST00000340611 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
BRAT1-201ENST00000340611 CKMP06732 381 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 SERPINA6P08185 405 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 PSMB4P28070 264 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 GSSP48637 474 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 SMAD3P84022 425 aaKnown RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 STX3Q13277 289 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 CBX2Q14781 532 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 KYAT3Q6YP21 454 aaKnown RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 PID1Q7Z2X4 250 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 THAP11Q96EK4 314 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 HGH1Q9BTY7 390 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 ZC3H7BQ9UGR2 993 aaKnown RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 CPQQ9Y646 472 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 TRIOO75962 3097 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 JCHAINP01591 159 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 GARSP41250 739 aaKnown RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 PPM1LQ5SGD2 360 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 TMC8Q8IU68 726 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 CLVS1Q8IUQ0 354 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-201ENST00000340611 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 AASDHPPTQ9NRN7 309 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 BRWD1Q9NSI6 2320 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 PLK2Q9NYY3 685 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 CCL26Q9Y258 94 aa15.12■□□□□ 0.01
BRAT1-201ENST00000340611 ANKRD34BA5PLL1 514 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 SDR42E2A6NKP2 422 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 J3KR12 359 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 C1QAP02745 245 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 TACR2P21452 398 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 HCAR3P49019 387 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ATXN3P54252 364 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 CRADDP78560 199 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 KDELC2Q7Z4H8 507 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 HPS6Q86YV9 775 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 LZTR1Q8N653 840 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ADAMTS19Q8TE59 1207 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 SLC7A5P2Q9GIP4 190 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 AGO1Q9UL18 857 aaKnown RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 DNAJC16Q9Y2G8 782 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ZFP37Q9Y6Q3 630 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 DENND4CQ5VZ89 1909 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ZBTB24O43167 697 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 FAM58BPP0C7Q3 252 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 PTPN3P26045 913 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ACVRL1P37023 503 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ITGADQ13349 1161 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 TRMT10BQ6PF06 316 aaKnown RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 OTOP3Q7RTS5 596 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 PDZD8Q8NEN9 1154 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 HMCESQ96FZ2 354 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 TRMT2BQ96GJ1 504 aaKnown RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ZNF778Q96MU6 729 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 APOL2Q9BQE5 337 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 PALMDQ9NP74 551 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-201ENST00000340611 ATG2AQ2TAZ0 1938 aa15.11■□□□□ 0.01
BRAT1-201ENST00000340611 A0A0D9SEW6 157 aa15.1■□□□□ 0.01
BRAT1-201ENST00000340611 AP1G1O43747 822 aa15.1■□□□□ 0.01
BRAT1-201ENST00000340611 GJB3O75712 270 aa15.1■□□□□ 0.01
BRAT1-201ENST00000340611 BPGMP07738 259 aa15.1■□□□□ 0.01
BRAT1-201ENST00000340611 SLC2A3P11169 496 aa15.1■□□□□ 0.01
BRAT1-201ENST00000340611 HARS2P49590 506 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms