RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 NPC1O15118 1278 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 PMM2O15305 246 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 PPP1R37O75864 691 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 ERVFC1P60507 584 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 ALDH6A1Q02252 535 aaKnown RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 MINDY4Q4G0A6 757 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 SEL1L3Q68CR1 1132 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 RABEPKQ7Z6M1 372 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 RPLP0P6Q8NHW5 317 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■□□□□ 10.1
LIN54-201ENST00000340417 SIT1Q9Y3P8 196 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 ACVRL1P37023 503 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 HSD17B3P37058 310 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 SIM2Q14190 667 aaPredicted RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 CNGA3Q16281 694 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 FUT11Q495W5 492 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 IL27RAQ6UWB1 636 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 KIAA1143Q96AT1 154 aaPredicted RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 RIOK2Q9BVS4 552 aaKnown RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 KLF15Q9UIH9 416 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 FBXO5Q9UKT4 447 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 INPP5AQ14642 412 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 SERPINA9Q86WD7 417 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 FNDC5Q8NAU1 212 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 AIM2O14862 343 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 KLHL2O95198 593 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 JAM2P57087 298 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 TDGQ13569 410 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 ELOCQ15369 112 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 TAS1R1Q7RTX1 841 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 NAF1Q96HR8 494 aaKnown RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 SLC12A4Q9UP95 1085 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 AXIN1O15169 862 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 IRF2BP1Q8IU81 584 aa12.81□□□□□ -0.36
LIN54-201ENST00000340417 ZNF514Q96K75 400 aaPredicted RBP12.81□□□□□ -0.36
LIN54-201ENST00000340417 MT-CO1P00395 513 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 FGFR3P22607 806 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 MLLT6P55198 1093 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 ZSCAN26Q16670 478 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 ZCCHC9Q8N567 271 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 KLC4Q9NSK0 619 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 ATP5HO75947 161 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 APBB3O95704 486 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 ALPIP09923 528 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 CD72P21854 359 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 HORMAD1Q86X24 394 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 CLP1Q92989 425 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 H2AFY2Q9P0M6 372 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 TAF1P21675 1872 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 NDUFS1P28331 727 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 RPS21P63220 83 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 OCA2Q04671 838 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 FAF1Q9UNN5 650 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 CCDC189A1A4V9 331 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 C16orf96A6NNT2 1141 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 PRR5-ARHGAP8B1AHC4 643 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 KBTBD12Q3ZCT8 623 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 KRT80Q6KB66 452 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 CHSY3Q70JA7 882 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 ZFP28Q8NHY6 868 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 STARD8Q92502 1023 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 SLCO1B7G3V0H7 640 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 M0QZQ0 153 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 LMAN2Q12907 356 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 C9orf50Q5SZB4 431 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 MIER2Q8N344 545 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
LIN54-201ENST00000340417 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
LIN54-201ENST00000340417 KDELR3O43731 214 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 CD48P09326 243 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PRKAG1P54619 331 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 STX4Q12846 297 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 TAF1AQ15573 450 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ARHGEF3Q9NR81 526 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 H3BNC9 293 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 NOL4O94818 638 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 CYP11A1P05108 521 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 UQCRBP14927 111 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 CYP4F2P78329 520 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 SLC9B2Q86UD5 537 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 SPPL3Q8TCT6 385 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms