RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 COL26A1Q96A83 441 aa16.33■□□□□ 0.2
H3F3C-201ENST00000340398 FRMD8Q9BZ67 464 aaPredicted RBP16.33■□□□□ 0.2
H3F3C-201ENST00000340398 TRIM4Q9C037 500 aa16.33■□□□□ 0.2
H3F3C-201ENST00000340398 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
H3F3C-201ENST00000340398 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
H3F3C-201ENST00000340398 PHPT1Q9NRX4 125 aaPredicted RBP16.33■□□□□ 0.2
H3F3C-201ENST00000340398 GOLGA6AQ9NYA3 693 aa16.33■□□□□ 0.2
H3F3C-201ENST00000340398 IGHV5-10-1A0A0J9YXX1 117 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PPM1DO15297 605 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 MAFKO60675 156 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CPNE6O95741 557 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CPP00450 1065 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 FAM87AP0C7U9 286 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CTPS1P17812 591 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 ITGB6P18564 788 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 MPSTP25325 297 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CDK3Q00526 305 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CTBSQ01459 385 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 ZNF235Q14590 738 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
H3F3C-201ENST00000340398 SDK2Q58EX2 2172 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
H3F3C-201ENST00000340398 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 FNIP1Q8TF40 1166 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 HSPH1Q92598 858 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PMEPA1Q969W9 287 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 TMEM159Q96B96 161 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 ZNF653Q96CK0 615 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 DTD2Q96FN9 168 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 ZNF599Q96NL3 588 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 NUDCD1Q96RS6 583 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 ARHGAP9Q9BRR9 750 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 GSDMCQ9BYG8 508 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 CD84Q9UIB8 345 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PHTF1Q9UMS5 762 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 TMEM98Q9Y2Y6 226 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PCDHB11Q9Y5F2 797 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 PCDHGA4Q9Y5G9 962 aa16.32■□□□□ 0.2
H3F3C-201ENST00000340398 TRBV23OR9-2A0A075B6M9 112 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 NPIPB15A6NHN6 443 aaPredicted RBP16.31■□□□□ 0.2
H3F3C-201ENST00000340398 H3BRJ5 948 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 SOCS5O75159 536 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 WISP1O95388 367 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 PDHA1P08559 390 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 FGF3P11487 239 aaPredicted RBP16.31■□□□□ 0.2
H3F3C-201ENST00000340398 GZMAP12544 262 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 ADCY8P40145 1251 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 ARSDP51689 593 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 ILF3Q12906 894 aaKnown RBP eCLIP16.31■□□□□ 0.2
H3F3C-201ENST00000340398 TBR1Q16650 682 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 RAET1GQ6H3X3 334 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 DOK6Q6PKX4 331 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 NAGSQ8N159 534 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 HTR3CQ8WXA8 447 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 SPOCK2Q92563 424 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 SCRN2Q96FV2 425 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 CSPG4P5Q96PW8 444 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 FAM117AQ9C073 453 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 CLMPQ9H6B4 373 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 TRNAU1APQ9NX07 287 aaKnown RBP16.31■□□□□ 0.2
H3F3C-201ENST00000340398 AIPL1Q9NZN9 384 aa16.31■□□□□ 0.2
H3F3C-201ENST00000340398 A0A1W2PQC6 194 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 PGLSO95336 258 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 RARAP10276 462 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 DPYSL2Q16555 572 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 TMCO3Q6UWJ1 677 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 TECPR1Q7Z6L1 1165 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.3■□□□□ 0.2
H3F3C-201ENST00000340398 PIH1D2Q8WWB5 315 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 BTBD6Q96KE9 485 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 CCDC74BQ96LY2 380 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 NAP1L5Q96NT1 182 aaPredicted RBP16.3■□□□□ 0.2
H3F3C-201ENST00000340398 MGME1Q9BQP7 344 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 ABCG8Q9H221 673 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 TMEM9Q9P0T7 183 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 SLC17A4Q9Y2C5 497 aa16.3■□□□□ 0.2
H3F3C-201ENST00000340398 TLN1Q9Y490 2541 aaKnown RBP16.3■□□□□ 0.2
H3F3C-201ENST00000340398 ITGB2P05107 769 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 CYP2A6P11509 494 aaPredicted RBP16.29■□□□□ 0.2
H3F3C-201ENST00000340398 PCK1P35558 622 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 ARL4AP40617 200 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 GPR1P46091 355 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 ZNF135P52742 658 aaPredicted RBP16.29■□□□□ 0.2
H3F3C-201ENST00000340398 PTSQ03393 145 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 TYRO3Q06418 890 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 KLHL30Q0D2K2 578 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 BIRC2Q13490 618 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 IHHQ14623 411 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 NR1D2Q14995 579 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 CLCA4Q14CN2 919 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 TMEM164Q5U3C3 297 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 MARC1Q5VT66 337 aa16.29■□□□□ 0.2
H3F3C-201ENST00000340398 MARK2Q7KZI7 788 aaKnown RBP16.29■□□□□ 0.2
H3F3C-201ENST00000340398 TRIM74Q86UV6 250 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms