RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TMEM253P0C7T8 217 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 COTL1Q14019 142 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NAB2Q15742 525 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KNOP1Q1ED39 458 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RIOX2Q8IUF8 465 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ZFPM1Q8IX07 1006 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D21Q8IYX1 336 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TRPV3Q8NET8 790 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 OR14K1Q8NGZ2 314 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C17orf50Q8WW18 174 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PIGKQ92643 395 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC6A7Q99884 636 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KCNH7Q9NS40 1196 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NDFIP2Q9NV92 336 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ACTR3BQ9P1U1 418 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NAGPAQ9UK23 515 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 L1RE1Q9UN81 338 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SAMD4AQ9UPU9 718 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TDRKHQ9Y2W6 561 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SH3GLB1Q9Y371 365 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DTNAQ9Y4J8 743 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 UMODL1Q5DID0 1318 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 BRCA1P38398 1863 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 M0R129 80 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PGRMC2O15173 223 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KMOO15229 486 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 VEGFDO43915 354 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RLN2P04090 185 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINE1P05121 402 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FGFR1P11362 822 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HPCAL1P37235 193 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ALDH3A2P51648 485 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HSD17B7P56937 341 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C5orf22Q49AR2 442 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RPL13AP3Q6NVV1 102 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC26A11Q86WA9 606 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TTLQ8NG68 377 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PEX13Q92968 403 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CAMK1GQ96NX5 476 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SPATA9Q9BWV2 254 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C3orf14Q9HBI5 128 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TRMT13Q9NUP7 481 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CCDC182A6NF36 153 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C2orf71A6NGG8 1288 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 POC1B-GALNT4F8VUJ3 575 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TIMP1P01033 207 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GPIP06744 558 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GSTM5P46439 218 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GLUD2P49448 558 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FMR1Q06787 632 aaKnown RBP eCLIP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TNK2Q07912 1038 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GRIK3Q13003 919 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RESP18Q5W5W9 173 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FAM220AQ7Z4H9 259 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NET1Q7Z628 596 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ADGRD2Q7Z7M1 963 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RASAL3Q86YV0 1011 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF514Q96K75 400 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PARD6BQ9BYG5 372 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GPR63Q9BZJ6 419 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RMI1Q9H9A7 625 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GDF3Q9NR23 364 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D13Q9NVG8 400 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MCM8Q9UJA3 840 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SNX6Q9UNH7 406 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C14orf166Q9Y224 244 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NDUFAF1Q9Y375 327 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA5Q9Y5H7 936 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 STX16O14662 325 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FGF10O15520 208 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 EOMESO95936 686 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LDLRP01130 860 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 THRBP10828 461 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 COX7A2P14406 83 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 IDO1P14902 403 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PVALBP20472 110 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PRDX5P30044 214 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 UQCRC1P31930 480 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 YWHABP31946 246 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ATP6V0D1P61421 351 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TRAF3Q13114 568 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LSM12Q3MHD2 195 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RALGPS1Q5JS13 557 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MFSD5Q6N075 450 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 BNC2Q6ZN30 1099 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ADAMTSL2Q86TH1 951 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC51AQ86UW1 340 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GKN2Q86XP6 184 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MREGQ8N565 214 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SPERTQ8NA61 448 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ITFG2Q969R8 447 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 P2RX7Q99572 595 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 BBS2Q9BXC9 721 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FBRSL1Q9HCM7 1045 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DNAJC13O75165 2243 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HEATR1Q9H583 2144 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FYNP06241 537 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms