RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NOL3O60936 208 aaKnown RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 HADHAP40939 763 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 ALDH3B2P48448 385 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 AGTR2P50052 363 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 GEMP55040 296 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 C21orf59P57076 290 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 POU4F1Q01851 419 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 UNC50Q53HI1 259 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 GPR180Q86V85 440 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 ARHGAP12Q8IWW6 846 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 HS3ST5Q8IZT8 346 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 MIER2Q8N344 545 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 DHRSXQ8N5I4 330 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 KCTD14Q9BQ13 255 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 FANCEQ9HB96 536 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 INTS7Q9NVH2 962 aaKnown RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 A0A087X1B8 175 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 PTGES3LE9PB15 166 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 H3BMQ9 156 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 IL7RP16871 459 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 NFKBIAP25963 317 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 NUP107P57740 925 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 ADRM1Q16186 407 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 NOL9Q5SY16 702 aaKnown RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 IFNLR1Q8IU57 520 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 CASP10Q92851 521 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 COG8Q96MW5 612 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 MCMBPQ9BTE3 642 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 TBC1D13Q9NVG8 400 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 UXTQ9UBK9 157 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 NUP214P35658 2090 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PSME4Q14997 1843 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 CDK14O94921 469 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 VARSP26640 1264 aaKnown RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 GRIK1P39086 918 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PNPLA4P41247 253 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 NRG1Q02297 640 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PYCR3Q53H96 274 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PAGE3Q5JUK9 113 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 ALKAL1Q6UXT8 129 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 STK32CQ86UX6 486 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 ANKRD60Q9BZ19 345 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PRM3Q9NNZ6 103 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 TBC1D23Q9NUY8 699 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 TRNAU1APQ9NX07 287 aaKnown RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 DLGAP1O14490 977 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 NOBOXO60393 691 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 TBX18O95935 607 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 OCM2P0CE71 109 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 OCMP0CE72 109 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 EEF1DP29692 281 aaKnown RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 FMO4P31512 558 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 MTPNP58546 118 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 UFM1P61960 85 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PFKPQ01813 784 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 OR4D1Q15615 310 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 RBBP7Q16576 425 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 ZNF678Q5SXM1 525 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PPP4R4Q6NUP7 873 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 GALNT18Q6P9A2 607 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 NPLQ9BXD5 320 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 AASSQ9UDR5 926 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 CNTN5O94779 1100 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 GPX3P22352 226 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 POLR2IP36954 125 aaKnown RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PIK3CGP48736 1102 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 SERPINH1P50454 418 aaKnown RBP16.11■□□□□ 0.17
SCARB1-202ENST00000339570 LIPEQ05469 1076 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 PTPRRQ15256 657 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 LARP4Q71RC2 724 aaKnown RBP eCLIP16.11■□□□□ 0.178e-9■□□□□ 10.2
SCARB1-202ENST00000339570 LYSMD3Q7Z3D4 306 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 ISCA2Q86U28 154 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 MUS81Q96NY9 551 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 RAD54BQ9Y620 910 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 U3KQV3 271 aa16.11■□□□□ 0.17
SCARB1-202ENST00000339570 KATNA1O75449 491 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 RSL1D1O76021 490 aaKnown RBP16.1■□□□□ 0.17
SCARB1-202ENST00000339570 RBP1P09455 135 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 HSPA1AP0DMV8 641 aaKnown RBP16.1■□□□□ 0.17
SCARB1-202ENST00000339570 HSPA1BP0DMV9 641 aaKnown RBP16.1■□□□□ 0.17
SCARB1-202ENST00000339570 COL6A2P12110 1019 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 GSK3BP49841 420 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 CARTPTQ16568 116 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 UGT3A2Q3SY77 523 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 PSMG2Q969U7 264 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 LRRC58Q96CX6 371 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 ITCHQ96J02 903 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 VAT1Q99536 393 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 RPF2Q9H7B2 306 aaKnown RBP16.1■□□□□ 0.17
SCARB1-202ENST00000339570 MRPL40Q9NQ50 206 aaKnown RBP16.1■□□□□ 0.17
SCARB1-202ENST00000339570 CNGB3Q9NQW8 809 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 K7EPI3 171 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 AZIN1O14977 448 aa16.1■□□□□ 0.17
SCARB1-202ENST00000339570 SLC6A2P23975 617 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms