RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SP7Q8TDD2 431 aaPredicted RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 PIH1D2Q8WWB5 315 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 OR52B2Q96RD2 323 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 DDX50Q9BQ39 737 aaKnown RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 EMILIN2Q9BXX0 1053 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 LSM7Q9UK45 103 aaKnown RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 G3BP2Q9UN86 482 aaKnown RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 WNT6Q9Y6F9 365 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 CAPN14A8MX76 684 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 E9PBE3 544 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 NEMP1O14524 444 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TRAFD1O14545 582 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 FZD6O60353 706 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 KLHL41O60662 606 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 WISP3O95389 354 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CLDN7O95471 211 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TFEBP19484 476 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 GRK2P25098 689 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 EPHA3P29320 983 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CRABP2P29373 138 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 MC4RP32245 332 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 STC1P52823 247 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TAF1AQ15573 450 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 FUT11Q495W5 492 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TTC31Q49AM3 519 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ACCSLQ4AC99 568 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 INO80DQ53TQ3 878 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 LIPMQ5VYY2 423 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 PAQR3Q6TCH7 311 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ELMOD1Q8N336 334 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 PHTF2Q8N3S3 785 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TTC30BQ8N4P2 665 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF366Q8N895 744 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 FIBINQ8TAL6 211 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 RAB3IL1Q8TBN0 382 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ERLEC1Q96DZ1 483 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 BIRC8Q96P09 236 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 APOL5Q9BWW9 433 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 NUF2Q9BZD4 464 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 MCOLN1Q9GZU1 580 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 POMKQ9H5K3 350 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TYW5A2RUC4 315 aaKnown RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 SIX3O95343 332 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CRTAMO95727 393 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 GM2AP17900 193 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT1A6P19224 532 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 LPOP22079 712 aaPredicted RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT1A1P22309 533 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT1A4P22310 534 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CDC25CP30307 473 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT1A3P35503 534 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT1A5P35504 534 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CLCN5P51795 746 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 EPHB1P54762 984 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CDH13P55290 713 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 NSUN2Q08J23 767 aaKnown RBP eCLIP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 OR4D1Q15615 310 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ZRANB3Q5FWF4 1079 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TECRLQ5HYJ1 363 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 LY6G5CQ5SRR4 150 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TMEM198Q66K66 360 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TMC5Q6UXY8 1006 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 DCAF4L2Q8NA75 395 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 HERVK_113Q902F9 699 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ZFYVE19Q96K21 471 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 LMLNQ96KR4 655 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC106Q9BWC9 280 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 CADM1Q9BY67 442 aaKnown RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 MRPL46Q9H2W6 279 aaKnown RBP7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 TDP1Q9NUW8 608 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 ANKRD6Q9Y2G4 727 aa7.39□□□□□ -1.23
SRFBP1-201ENST00000339397 LOC100653049A0A140TA62 436 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 C2orf81A6NN90 581 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 STX7O15400 261 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MGRN1O60291 552 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CLASP2O75122 1294 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NIPSNAP2O75323 286 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 KRT34O76011 436 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 LTA4HP09960 611 aaKnown RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SRCP12931 536 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CEBPBP17676 345 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PTPN2P17706 415 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 NCF2P19878 526 aaPredicted RBP7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 HNF1BP35680 557 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 XIAPP98170 497 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 PTPRNQ16849 979 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 POM121L1PQ3SYA9 428 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MPPE1Q53F39 396 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 SPDYAQ5MJ70 313 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 MRNIPQ6NTE8 343 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 FAM151BQ6UXP7 276 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 ADGRG2Q8IZP9 1017 aa7.38□□□□□ -1.23
SRFBP1-201ENST00000339397 CLDN19Q8N6F1 224 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms