RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ACSS2Q9NR19 701 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PXDNLA1KZ92 1463 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ROBO2Q9HCK4 1378 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ABHD14A-ACY1A0A1B0GW23 586 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 C19orf81C9J6K1 198 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TGDSO95455 350 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 UGT2B4P06133 528 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CD86P42081 329 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 RBM20Q5T481 1227 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ERI1Q8IV48 349 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 PGAM4Q8N0Y7 254 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 OR52K2Q8NGK3 314 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ZFP28Q8NHY6 868 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 POP5Q969H6 163 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CLCC1Q96S66 551 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SLC22A4Q9H015 551 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 COQ10BQ9H8M1 238 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TMLHEQ9NVH6 421 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CLUHO75153 1309 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 METTL21EPA6NDL7 271 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 MAPTP10636 758 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 PDIA6Q15084 440 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SNAPC1Q16533 368 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ANGEL2Q5VTE6 544 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 MPP5Q8N3R9 675 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TBC1D16Q8TBP0 767 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF607Q96SK3 696 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TRAF6Q9Y4K3 522 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 OTCP00480 354 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SLC9A3P48764 834 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 AMPD2Q01433 879 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SLITRK4Q8IW52 837 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 S100PBPQ96BU1 408 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CIPCQ9C0C6 399 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 DNAJC5Q9H3Z4 198 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TREM1Q9NP99 234 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 NDOR1Q9UHB4 597 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 MAU2Q9Y6X3 613 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ISPDA4D126 451 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 EFCAB9A8MZ26 197 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SERPINB7O75635 380 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 IFNA16P05015 189 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CKMP06732 381 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 GNA12Q03113 381 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 PSMD5Q16401 504 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 EARS2Q5JPH6 523 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ANKRD26P1Q6NSI1 321 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SPATA19Q7Z5L4 167 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 LGI2Q8N0V4 545 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SPOCK2Q92563 424 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TNFRSF25Q93038 417 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SYT15Q9BQS2 421 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 OSBPL7Q9BZF2 842 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF350Q9GZX5 532 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SNTG1Q9NSN8 517 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 IFT80Q9P2H3 777 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ZNHIT2Q9UHR6 403 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 DCDC2CA8MYV0 355 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 FOXO6A8MYZ6 492 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 AQP1P29972 269 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ADGRE1Q14246 886 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 TMEM119Q4V9L6 283 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 XKR6Q5GH73 641 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF484Q5JVG2 852 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 VWA5B1Q5TIE3 1220 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ANXA8L1Q5VT79 327 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 IRAK1BP1Q5VVH5 260 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CMC1Q7Z7K0 106 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CIR1Q86X95 450 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 CHST13Q8NET6 341 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 PPP1R13LQ8WUF5 828 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 MRPS31Q92665 395 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 ATG4CQ96DT6 458 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 AGO4Q9HCK5 861 aaKnown RBP9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SNTG2Q9NY99 539 aa9.8□□□□□ -0.84
COL4A6-201ENST00000334504 SH3D21A4FU49 640 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CASTOR2A6NHX0 329 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ALOX15BO15296 676 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 IFNGP01579 166 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ICAM1P05362 532 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 LIPEQ05469 1076 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CTBP1Q13363 440 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ZNHIT3Q15649 155 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 RALGPS1Q5JS13 557 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 HECTD3Q5T447 861 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 C16orf59Q7L2K0 433 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SH3RF1Q7Z6J0 888 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 NEUROD4Q9HD90 331 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 BPIFA1Q9NP55 256 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 UPB1Q9UBR1 384 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PLLPQ9Y342 182 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 REXO2Q9Y3B8 237 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 A0A075B6Q4 140 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms