RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 UBXN7O94888 489 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 C9P02748 559 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP2C8P10632 490 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ITGB6P18564 788 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAM15Q13444 863 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM162BQ5T6X4 162 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NEK7Q8TDX7 302 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 WWTR1Q9GZV5 400 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM230AA0A1W2PPH8 454 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF821O75541 412 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ITGB8P26012 769 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 LCN1P31025 176 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 AFF3P51826 1226 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 EFHC1Q5JVL4 640 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 USP43Q70EL4 1123 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 BATF2Q8N1L9 274 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ETNPPLQ8TBG4 499 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 RIPOR3Q96MK2 946 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PHF12Q96QT6 1004 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 POLR1EQ9GZS1 481 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC5A4Q9NY91 659 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 BFARQ9NZS9 450 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CASZ1Q86V15 1759 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PMLP29590 882 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GABRA2P47869 451 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GALEQ14376 348 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF181Q2M3W8 571 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 EGFLAMQ63HQ2 1017 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CERS6Q6ZMG9 384 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GAREM2Q75VX8 874 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC37A3Q8NCC5 494 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC44A1Q8WWI5 657 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC13A3Q8WWT9 602 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SMIM12Q96EX1 92 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 AGAP3Q96P47 875 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SEMA6CQ9H3T2 930 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CERS4Q9HA82 394 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 KMT5AQ9NQR1 393 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PITPNC1Q9UKF7 332 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 DAGLAQ9Y4D2 1042 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATG4BQ9Y4P1 393 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAM11O75078 769 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRNA1P02708 482 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PGK2P07205 417 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 RAB31Q13636 194 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TTC38Q5R3I4 469 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRAMEF17Q5VTA0 474 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 DTHD1Q6ZMT9 781 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 Q6ZUG5 572 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TUSC5Q8IXB3 177 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM217AQ8IXS0 508 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPATA4Q8NEY3 305 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 BEST4Q8NFU0 473 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ANGPTL6Q8NI99 470 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 HM13Q8TCT9 377 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 C7orf26Q96N11 449 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF282Q9UDV7 671 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZFR2Q9UPR6 939 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABCC3O15438 1527 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CPS1P31327 1500 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TEAD4Q15561 434 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NTRK3Q16288 839 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SH3D19Q5HYK7 790 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLYATQ6IB77 296 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 MCFD2Q8NI22 146 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GDPD5Q8WTR4 605 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TM9SF4Q92544 642 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 RAB8BQ92930 207 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GOLPH3Q9H4A6 298 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 A0A096LPI6 279 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PP2D1A8MPX8 630 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 MINDY4BA8MYZ0 360 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GOSR2O14653 212 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TCEA1P23193 301 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRNA5P30532 468 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC22A25Q6T423 547 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPP1R3BQ86XI6 285 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TRAPPC5Q8IUR0 188 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ITCHQ96J02 903 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ACE2Q9BYF1 805 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 KAT14Q9H8E8 782 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC24A2Q9UI40 661 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SSH2Q76I76 1423 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADGRL3Q9HAR2 1447 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 BHMG1C9JSJ3 638 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 E7ENX8 843 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 AKAP3O75969 853 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPR1P46091 355 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 STT3AP46977 705 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.445e-6■■■□□ 17.2
CDC42BPA-201ENST00000334218 PIGPP57054 158 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPP4CP60510 307 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 C3orf62Q6ZUJ4 267 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYB5R4Q7L1T6 521 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 LINGO2Q7L985 606 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TSPAN33Q86UF1 283 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPR65Q8IYL9 337 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF471Q9BX82 626 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 DHX35Q9H5Z1 703 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms