RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 PTGES3LE9PB15 166 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SYNCRIPO60506 623 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 GSTT2P0CG29 244 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 GSTT2BP0CG30 244 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 ADRA1BP35368 520 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 TKTL1P51854 596 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 BTG3Q14201 252 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 FRG1Q14331 258 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 PGS1Q32NB8 556 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SLC36A3Q495N2 470 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 C6orf183Q5T699 404 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 GPR158Q5T848 1215 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 IGFN1Q86VF2 1251 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 DCBLD1Q8N8Z6 715 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 ANKRD49Q8WVL7 239 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 HERC2P3Q9BVR0 1158 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 KLHL25Q9H0H3 589 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 POLE4Q9NR33 117 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 CCM2LQ9NUG4 571 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CMTM6Q9NX76 183 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SMPD3Q9NY59 655 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 VPS51Q9UID3 782 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 FBXO5Q9UKT4 447 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 WDR37Q9Y2I8 494 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 TIMM13Q9Y5L4 95 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 TTC24A2A3L6 582 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 HTR3EA5X5Y0 456 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 H0YJX3 145 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 ALBP02768 609 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 USP17L7P0C7H9 530 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 RPS9P46781 194 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 FOXA1P55317 472 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 POLD3Q15054 466 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CELF3Q5SZQ8 465 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 RALGPS2Q86X27 583 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CLEC4FQ8N1N0 589 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SH3RF2Q8TEC5 729 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 TRPC4APQ8TEL6 797 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 WNT8BQ93098 351 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 C19orf60Q96EN9 201 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 CENPNQ96H22 339 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 MAELQ96JY0 434 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 ULBP1Q9BZM6 244 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 MID1IP1Q9NPA3 183 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 COL4A5P29400 1685 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 OR51F1A6NGY5 319 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 YJEFN3A6XGL0 299 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 HBP1O60381 514 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NPHS1O60500 1241 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TSPAN1O60635 241 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 CRCPO75575 148 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 ZNF12P17014 697 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 IGFBP6P24592 240 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 CAPGP40121 348 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 KCNC1P48547 511 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NFYCQ13952 458 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 UGP2Q16851 508 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PKN3Q6P5Z2 889 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PPHLN1Q8NEY8 458 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 CCDC138Q96M89 665 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NXF3Q9H4D5 531 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 SMARCAD1Q9H4L7 1026 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 AGPAT4Q9NRZ5 378 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 SLAMF8Q9P0V8 285 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 GJD2Q9UKL4 321 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 MAGEB16A2A368 324 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 AGRPO00253 132 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 C22orf31O95567 290 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 OPRL1P41146 370 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PAFAH1B3Q15102 231 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 MOGQ16653 247 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 DCAF15Q66K64 600 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 KCTD11Q693B1 232 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 STK32CQ86UX6 486 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 RSPH1Q8WYR4 309 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 SNX19Q92543 992 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 SLC35B4Q969S0 331 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TNIP3Q96KP6 325 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NSUN5Q96P11 429 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 TBL1YQ9BQ87 522 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 CORO1BQ9BR76 489 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TRIM15Q9C019 465 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 OR12D3Q9UGF7 316 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NDUFAF1Q9Y375 327 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 KRBA1A5PL33 1030 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PIP5K1BO14986 540 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 CYP2C8P10632 490 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 JAK1P23458 1154 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 DCKP27707 260 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 IST1P53990 364 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PRKAA2P54646 552 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 DIO3P55073 304 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NEPROQ6NW34 567 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 CATSPER4Q7RTX7 472 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 CHAC2Q8WUX2 184 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 KCTD14Q9BQ13 255 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 C1orf50Q9BV19 199 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms