RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SCN5AQ14524 2016 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 ZNF840PA6NDX5 716 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 UBXN8O00124 270 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 FBP2O00757 339 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 ACOT8O14734 319 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 INSIG1O15503 277 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 HOXA2O43364 376 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 COCHO43405 550 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 BCAS2O75934 225 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 KLKB1P03952 638 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 MTHFD2P13995 350 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 UQCRBP14927 111 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 RPL17P18621 184 aaKnown RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 PMLP29590 882 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 ALDH1A3P47895 512 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SCNN1BP51168 640 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 CDH13P55290 713 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 NOGQ13253 232 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 LRP8Q14114 963 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 UGT3A2Q3SY77 523 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 AGKQ53H12 422 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 REP15Q6BDI9 236 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SLC8B1Q6J4K2 584 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 ZFP1Q6P2D0 407 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 LARP4Q71RC2 724 aaKnown RBP eCLIP14.54□□□□□ -0.081e-8■□□□□ 9.3
TPM3-206ENST00000330188 FAM126BQ8IXS8 530 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 BHLHE22Q8NFJ8 381 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 MDGA1Q8NFP4 955 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 RHEBL1Q8TAI7 183 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 ZNF512Q96ME7 567 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 ATOH8Q96SQ7 321 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 HMX1Q9NP08 348 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 CACNA2D2Q9NY47 1150 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 BCAP29Q9UHQ4 241 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SARDHQ9UL12 918 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 LRRC14BA6NHZ5 514 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 TRIM38O00635 465 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 RNASEH1O60930 286 aaKnown RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 GPC4O75487 556 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 CLDN11O75508 207 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SIX3O95343 332 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 PRLP01236 227 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 HDCP19113 662 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PSMD8P48556 350 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PSME3P61289 254 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SH3BP2P78314 561 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 STX5Q13190 355 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 SETMARQ53H47 684 aaPredicted RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 HECTD3Q5T447 861 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 KLHDC10Q6PID8 442 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 GLT6D1Q7Z4J2 308 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 CLYBLQ8N0X4 340 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PDZD8Q8NEN9 1154 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 OR4K2Q8NGD2 314 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 PLD4Q96BZ4 506 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 RMDN1Q96DB5 314 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 C19orf60Q96EN9 201 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 C3orf30Q96M34 536 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 CEP295NLQ96MC4 621 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 TFB2MQ9H5Q4 396 aaKnown RBP14.54□□□□□ -0.08
TPM3-206ENST00000330188 CCDC167Q9P0B6 97 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 MTRRQ9UBK8 725 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 MED16Q9Y2X0 877 aa14.54□□□□□ -0.08
TPM3-206ENST00000330188 UBA6A0AVT1 1052 aaPredicted RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 ILVBLA1L0T0 632 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 MAP3K13O43283 966 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 STC2O76061 302 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 RHOBTB1O94844 696 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 CDK14O94921 469 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 MT-CO1P00395 513 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 RHOCP08134 193 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PSMA3P25788 255 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 CORO1AP31146 461 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 CYTH1Q15438 398 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 TAF1AQ15573 450 aaPredicted RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 GRAMD1BQ3KR37 738 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 AFTPHQ6ULP2 937 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PCDH20Q8N6Y1 951 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 SNX31Q8N9S9 440 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PHC3Q8NDX5 983 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 LPGAT1Q92604 370 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 TUBGCP5Q96RT8 1024 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 DDX50Q9BQ39 737 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 TDRD1Q9BXT4 1180 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 FBRSL1Q9HCM7 1045 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ARIH1Q9Y4X5 557 aaPredicted RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 ATP6AP2A0A1C7CYW4 349 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PPP6CO00743 305 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ATP6AP2O75787 350 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 EFEMP2O95967 443 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 F11P03951 625 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 FGF4P08620 206 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 HMGA1P17096 107 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms