RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 ITPKAP23677 461 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 TTPAP49638 278 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 RPL38P63173 70 aaKnown RBP11.83□□□□□ -0.52
DDR1-223ENST00000324771 PARP15Q460N3 678 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 KLHL4Q9C0H6 718 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 PER2O15055 1255 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 INSIG1O15503 277 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 TYROBPO43914 113 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 RFPL1O75677 317 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 RPP40O75818 363 aaKnown RBP11.83□□□□□ -0.52
DDR1-223ENST00000324771 GALTP07902 379 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 TMED1Q13445 227 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 PAQR3Q6TCH7 311 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 AFTPHQ6ULP2 937 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 DHFR2Q86XF0 187 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 SIDT2Q8NBJ9 832 aaKnown RBP11.83□□□□□ -0.52
DDR1-223ENST00000324771 GPR156Q8NFN8 814 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 ZNF398Q8TD17 642 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDR1-223ENST00000324771 FCRL5Q96RD9 977 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 LRMDAQ9H2I8 198 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 BATF3Q9NR55 127 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 TLR6Q9Y2C9 796 aa11.83□□□□□ -0.52
DDR1-223ENST00000324771 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 FKBP6O75344 327 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PRAMEF1O95521 474 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 ACADSP16219 412 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 EFNA1P20827 205 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 IDH3AP50213 366 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 IRF8Q02556 426 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 TRAF2Q12933 501 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PAFAH1B3Q15102 231 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 SETMARQ53H47 684 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 TAGAPQ8N103 731 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 COL22A1Q8NFW1 1626 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 FBXO30Q8TB52 745 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 C7orf26Q96N11 449 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 CDK15Q96Q40 435 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 KCTD14Q9BQ13 255 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 SLC25A23Q9BV35 468 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 FAM126AQ9BYI3 521 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 TXLNGYQ9BZA5 131 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 KIAA1551Q9HCM1 1747 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 YIPF1Q9Y548 306 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 NRAPQ86VF7 1730 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 TMEM247A6NEH6 219 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 MGAT4DA6NG13 374 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 STX16-NPEPL1H3BU86 382 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PRMT5O14744 637 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 FAM189A1O60320 539 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 ALDOAP04075 364 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 CNPP09543 421 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 HSPA7P48741 367 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 GALNT2Q10471 571 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 FRG1Q14331 258 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 VPS26BQ4G0F5 336 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PREPLQ4J6C6 727 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 SIRPB2Q5JXA9 342 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 USP45Q70EL2 814 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PHTF2Q8N3S3 785 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 MCOLN3Q8TDD5 553 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 NMD3Q96D46 503 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 MYO19Q96H55 970 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
DDR1-223ENST00000324771 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 KRT6AP02538 564 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 KRT6BP04259 564 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 OR56A5P0C7T3 313 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 CYBAP13498 195 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 GLDCP23378 1020 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 KRT6CP48668 564 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 MRPS35P82673 323 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 CHRNB3Q05901 458 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 TTC33Q6PID6 262 aaPredicted RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 ZNF621Q6ZSS3 439 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
DDR1-223ENST00000324771 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 PHACTR4Q8IZ21 702 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 COPS8Q99627 209 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 SNX5Q9Y5X3 404 aa11.82□□□□□ -0.52
DDR1-223ENST00000324771 CSKP41240 450 aa11.81□□□□□ -0.52
DDR1-223ENST00000324771 ZIK1Q3SY52 487 aaPredicted RBP11.81□□□□□ -0.52
DDR1-223ENST00000324771 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
DDR1-223ENST00000324771 CRTC3Q6UUV7 619 aa11.81□□□□□ -0.52
DDR1-223ENST00000324771 CCDC149Q6ZUS6 474 aa11.81□□□□□ -0.52
DDR1-223ENST00000324771 ZC3HC1Q86WB0 502 aaKnown RBP11.81□□□□□ -0.52
DDR1-223ENST00000324771 NKAPQ8N5F7 415 aaKnown RBP11.81□□□□□ -0.52
DDR1-223ENST00000324771 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
DDR1-223ENST00000324771 PPM1MQ96MI6 270 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms