RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ALDH2P05091 517 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 FCER2P06734 321 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 LTA4HP09960 611 aaKnown RBP7.91□□□□□ -1.14
CIITA-201ENST00000324288 TFPIP10646 304 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 BCL2L1Q07817 233 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 ATP13A5Q4VNC0 1218 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 XKR6Q5GH73 641 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 FNDC11Q9BVV2 318 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 CLTCQ00610 1675 aaKnown RBP7.91□□□□□ -1.14
CIITA-201ENST00000324288 AFDNP55196 1824 aaKnown RBP7.91□□□□□ -1.14
CIITA-201ENST00000324288 NPEPPSL1A6NEC2 478 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 ARHGDIBP52566 201 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 HMBOX1Q6NT76 420 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 KCTD8Q6ZWB6 473 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 JSRP1Q96MG2 331 aaPredicted RBP7.91□□□□□ -1.14
CIITA-201ENST00000324288 DUSP9Q99956 384 aaKnown RBP7.91□□□□□ -1.14
CIITA-201ENST00000324288 FBXO44Q9H4M3 255 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 TMPRSS4Q9NRS4 437 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 SLC27A5Q9Y2P5 690 aa7.91□□□□□ -1.14
CIITA-201ENST00000324288 PREX2Q70Z35 1606 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 H7C0S8 307 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 MDM4O15151 490 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 IFNA6P05013 189 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CDK7P50613 346 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 NRG3P56975 720 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 GNA12Q03113 381 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SEMA5AQ13591 1074 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ACVR2BQ13705 512 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SUZ12Q15022 739 aaKnown RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 C9orf131Q5VYM1 1079 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 FAM151BQ6UXP7 276 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CBR4Q8N4T8 237 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 OR52J3Q8NH60 311 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 TBL1XO60907 577 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SNX4O95219 450 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 RAB2AP61019 212 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ITPK1Q13572 414 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 EGFL6Q8IUX8 553 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 OR6K2Q8NGY2 324 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ATP6AP2A0A1C7CYW4 349 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 E5RJQ4 531 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 G3V2T6 193 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 FFAR2O15552 330 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SNAP91O60641 907 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ATP6AP2O75787 350 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 APOL3O95236 402 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SPATA31D3P0C874 917 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 YAP1P46937 504 aaKnown RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 AQP4P55087 323 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 TXNL4AP83876 142 aaKnown RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 PCDH1Q08174 1060 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 BLMHQ13867 455 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SPATA31D4Q6ZUB0 917 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 FAM13CQ8NE31 585 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 OR2T34Q8NGX1 318 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 OR2T3Q8NH03 318 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SMG7Q92540 1137 aaKnown RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 AHCTF1Q8WYP5 2266 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SMCO3A2RU48 225 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 METTL21EPA6NDL7 271 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 GABBR2O75899 941 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CCNYL3P0C7X3 344 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 GRB14Q14449 540 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ZNF267Q14586 743 aaPredicted RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 CRELD2Q6UXH1 353 aaPredicted RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 TNFRSF25Q93038 417 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 LPPQ93052 612 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 RACGAP1Q9H0H5 632 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CPSF4LA6NMK7 179 aaKnown RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 H3BRB1 525 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 AURKAO14965 403 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CCNB1P14635 433 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 AKT2P31751 481 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 LCN1P1Q5VSP4 162 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 BICRALQ6AI39 1079 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 PHC2Q8IXK0 858 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SUSD6Q92537 303 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 OSER1Q9NX31 292 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 KIAA1257Q9ULG3 409 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 TBC1D30Q9Y2I9 924 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 LOC100509620A0A075B734 347 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 DCLK1O15075 740 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 SCAMP1O15126 338 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 METTL18O95568 372 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 ITIH1P19827 911 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 USP45Q70EL2 814 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 CXorf40BQ96DE9 158 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 POLLQ9UGP5 575 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 FBXO9Q9UK97 447 aaPredicted RBP7.9□□□□□ -1.14
CIITA-201ENST00000324288 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 NCKAP1Q9Y2A7 1128 aa7.9□□□□□ -1.14
CIITA-201ENST00000324288 HOXA2O43364 376 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 GZMAP12544 262 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 MYBPC3Q14896 1274 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 WSCD1Q658N2 575 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 ZNF720Q7Z2F6 126 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms