RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 RPS21P63220 83 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 GUCY2DQ02846 1103 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 MTM1Q13496 603 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ITGA9Q13797 1035 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CST6Q15828 149 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CCDC85BQ15834 202 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 UGP2Q16851 508 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 SETMARQ53H47 684 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 IGF2-ASQ6U949 168 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PACS1Q6VY07 963 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 EP400NLQ6ZTU2 488 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TPGS1Q6ZTW0 290 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CENPUQ71F23 418 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TAOK1Q7L7X3 1001 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 C12orf40Q86WS4 652 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CNTN4Q8IWV2 1026 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 DTWD2Q8NBA8 298 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 GRIN3AQ8TCU5 1115 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ANKRD7Q92527 254 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 KLHDC7BQ96G42 594 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 FAM167BQ9BTA0 163 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ZSCAN5AQ9BUG6 496 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 KIFC1Q9BW19 673 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CARD6Q9BX69 1037 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 GPR27Q9NS67 375 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ZSCAN32Q9NX65 697 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 BFARQ9NZS9 450 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 DMGDHQ9UI17 866 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ZMIZ1Q9ULJ6 1067 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 SOX13Q9UN79 622 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PCDHGB2Q9Y5G2 931 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 C2orf81A6NN90 581 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 AGAP14A8MT82 685 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CBX4O00257 560 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 AREL1O15033 823 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 KPNA5O15131 536 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 LATO43561 262 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 VEGFDO43915 354 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TSPAN3O60637 253 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 FKBP9O95302 570 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 EGFP01133 1207 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 MMP2P08253 660 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 SLC2A4P14672 509 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PGAM1P18669 254 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 RPS3P23396 243 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 RBL1P28749 1068 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 STX2P32856 288 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 MMP12P39900 470 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CXCL12P48061 93 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CCNHP51946 323 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 STC1P52823 247 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 EIF3BP55884 814 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PTK2BQ14289 1009 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PON2Q15165 354 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CCDC38Q502W7 563 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 USP39Q53GS9 565 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 FSCBQ5H9T9 825 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 WDR45BQ5MNZ6 344 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ESRP1Q6NXG1 681 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TTC23LQ6PF05 361 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 AFTPHQ6ULP2 937 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 IL27RAQ6UWB1 636 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 KYAT3Q6YP21 454 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 GSTA5Q7RTV2 222 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 APCDD1Q8J025 514 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 PDIK1LQ8N165 341 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TRAM1L1Q8N609 369 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CCNYQ8ND76 341 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TSTD1Q8NFU3 115 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 OR7D4Q8NG98 312 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 COG1Q8WTW3 980 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 GAB3Q8WWW8 586 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 FAM161BQ96MY7 647 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 TMEM109Q9BVC6 243 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 FSD1LQ9BXM9 530 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 MFSD1Q9H3U5 465 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 LMAN1LQ9HAT1 526 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 NLE1Q9NVX2 485 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 ARGLU1Q9NWB6 273 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 CACNA2D2Q9NY47 1150 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 NCKIPSDQ9NZQ3 722 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 VPS18Q9P253 973 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 HECAQ9UBI9 543 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 NUDT5Q9UKK9 219 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 HEY1Q9Y5J3 304 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 NUP205Q92621 2012 aa3.3□□□□□ -1.88
SCAMP1-201ENST00000320280 A0A1W2PQF6 199 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 MROH6A6NGR9 719 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 METTL12A8MUP2 240 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 PRRT4C9JH25 899 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 E7EVH7 732 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 PROB1E7EW31 1015 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 CTIFO43310 598 aaKnown RBP3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 KLF8O95600 359 aaPredicted RBP3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 ACADMP11310 421 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 CDK4P11802 303 aa3.29□□□□□ -1.88
SCAMP1-201ENST00000320280 IVDP26440 423 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms