RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GALNT3Q14435 633 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 FBXO48Q5FWF7 155 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 TMEM53Q6P2H8 277 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PRSS55Q6UWB4 352 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 FAM47BQ8NA70 645 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PCSK9Q8NBP7 692 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 VPS50Q96JG6 964 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 SMIM14Q96QK8 99 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 OXSMQ9NWU1 459 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 CDY1Q9Y6F8 540 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 DLX3O60479 287 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 OCM2P0CE71 109 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 OCMP0CE72 109 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 OR1E1P30953 314 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 ATP1A4Q13733 1029 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 ANKRD12Q6UB98 2062 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 DCP1BQ8IZD4 617 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PGAM4Q8N0Y7 254 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 CENPSQ8N2Z9 138 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 DBF4BQ8NFT6 615 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 CD99L2Q8TCZ2 262 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 HEXDCQ8WVB3 486 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 SLCO4A1Q96BD0 722 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PLEKHA8Q96JA3 519 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 NAA50Q9GZZ1 169 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 DUS2Q9NX74 493 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 VPS28Q9UK41 221 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PCDHB5Q9Y5E4 795 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 A0A0U1RQS6 177 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 A0A1W2PPW3 197 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 J3QRK9 145 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 BCAP31P51572 246 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 ARSDP51689 593 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 CSE1LP55060 971 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 RAB10P61026 200 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 SLC12A1Q13621 1099 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 LRRC8EQ6NSJ5 796 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 HMBOX1Q6NT76 420 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 ARMCX6Q7L4S7 300 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 LYSMD3Q7Z3D4 306 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 GPR141Q7Z602 305 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 CLEC14AQ86T13 490 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 PIM3Q86V86 326 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 COLGALT2Q8IYK4 626 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 RP9Q8TA86 221 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 HDAC10Q969S8 669 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 FBXL8Q96CD0 374 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 CNOT11Q9UKZ1 510 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 AP4S1Q9Y587 144 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 SNX13Q9Y5W8 968 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 YWHAQP27348 245 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 ARCN1P48444 511 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 TRIM71Q2Q1W2 868 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 FGD3Q5JSP0 725 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 CCSAPQ6IQ19 270 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 TAS1R1Q7RTX1 841 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 PCDH20Q8N6Y1 951 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 TBC1D15Q8TC07 691 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 TANKQ92844 425 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 NOL11Q9H8H0 719 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 STARD7Q9NQZ5 370 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
SHROOM1-201ENST00000319854 C5orf42Q9H799 3197 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 HTRA2O43464 458 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 PRSS56P0CW18 603 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TFEBP19484 476 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 CD151P48509 253 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 MANEALQ5VSG8 457 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 METTL21CQ5VZV1 264 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 RNF19BQ6ZMZ0 732 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TSGA13Q96PP4 275 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 OLFM1Q99784 485 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 OSBPL11Q9BXB4 747 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 ZYG11BQ9C0D3 744 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 CLK4Q9HAZ1 481 aaKnown RBP15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 PNPLA3Q9NST1 481 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TBC1D23Q9NUY8 699 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 A0A0D9SEW6 157 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 KCNA5P22460 613 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 SP3Q02447 781 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 ART3Q13508 389 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 POLD3Q15054 466 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 SEL1L3Q68CR1 1132 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 RANBP10Q6VN20 620 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 DLG3Q92796 817 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 CNDP1Q96KN2 507 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 UROC1Q96N76 676 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 SEMA3CQ99985 751 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TRIM62Q9BVG3 475 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 C1QTNF1Q9BXJ1 281 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 POMKQ9H5K3 350 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 ENTPD7Q9NQZ7 604 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TRNAU1APQ9NX07 287 aaKnown RBP15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 ADA2Q9NZK5 511 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 BMP10O95393 424 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 HDCP19113 662 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 TYMPP19971 482 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 MAGEA12P43365 314 aa15.55■□□□□ 0.08
SHROOM1-201ENST00000319854 BNIP3Q12983 259 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms