RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MTCL1Q9Y4B5 1905 aaKnown RBP13.08□□□□□ -0.31
CPNE1-201ENST00000317677 A0A088AWK7 358 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 GFRA2O00451 464 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ITM2AO43736 263 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ABCG1P45844 678 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 BCAP31P51572 246 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 KCNC4Q03721 635 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 TLR1Q15399 786 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ADGRF1Q5T601 910 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 CXorf57Q6NSI4 855 aaKnown RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ACVR1CQ8NER5 493 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 CDKL2Q92772 493 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 CDX2Q99626 313 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 THTPAQ9BU02 230 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ENTPD7Q9NQZ7 604 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 STOML2Q9UJZ1 356 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 TCAF1Q9Y4C2 921 aa13.08□□□□□ -0.32
CPNE1-201ENST00000317677 HELZP42694 1942 aaKnown RBP13.08□□□□□ -0.32
CPNE1-201ENST00000317677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 COPEO14579 308 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 TPP1O14773 563 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 DNAJA2O60884 412 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CSPG5O95196 566 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CXCL14O95715 111 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CNTFP26441 200 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CA8P35219 290 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 GP5P40197 560 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 RGRP47804 291 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PPP3CCP48454 512 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ITKQ08881 620 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ESRP1Q6NXG1 681 aaKnown RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 Q6ZNB5 142 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 KCNMB4Q86W47 210 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CCDC117Q8IWD4 279 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 SLC25A41Q8N5S1 370 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 RBBP8Q99708 897 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 MAGEH1Q9H213 219 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ARNT2Q9HBZ2 717 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PLLPQ9Y342 182 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CARNS1A5YM72 827 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 H3BNX3 289 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 KLF11O14901 512 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 PRKCGP05129 697 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 GJA1P17302 382 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 GABRR2P28476 465 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 MAGEA12P43365 314 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 ARCN1P48444 511 aaKnown RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CCT8P50990 548 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 RABGAP1LQ5R372 815 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 STXBP5Q5T5C0 1151 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 LGSNQ5TDP6 509 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 LPCAT4Q643R3 524 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CHST9Q7L1S5 443 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 IQCF2Q8IXL9 164 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 SLC22A17Q8WUG5 538 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CPNE1Q99829 537 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 SLC13A1Q9BZW2 595 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 IARS2Q9NSE4 1012 aaKnown RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-201ENST00000317677 TBC1D23Q9NUY8 699 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 SELENONQ9NZV5 590 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 EMCNQ9ULC0 261 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 INSL6Q9Y581 213 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 CPQQ9Y646 472 aa13.07□□□□□ -0.32
CPNE1-201ENST00000317677 H3BSA7 217 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 AP3B1O00203 1094 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 CLDN11O75508 207 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 CD160O95971 181 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 GSRP00390 522 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 PTPN2P17706 415 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 NFKBIAP25963 317 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 GABRB3P28472 473 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms