RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 CARTPTQ16568 116 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 METTL16Q86W50 562 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 MREGQ8N565 214 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TPK1Q9H3S4 243 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TMPRSS11EQ9UL52 423 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 GADD45AP24522 165 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 GP5P40197 560 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 GRK6P43250 576 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 OC90Q02509 493 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 ZNF155Q12901 538 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 NR1I3Q14994 352 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 OR8D1Q8WZ84 308 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 MRM3Q9HC36 420 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 AP1M2Q9Y6Q5 423 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 CCRL2O00421 344 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 SLC30A4O14863 429 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 IL1AP01583 271 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 KLHL26Q53HC5 615 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 AASSQ9UDR5 926 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 SLC24A2Q9UI40 661 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 ITGA11Q9UKX5 1188 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 MAU2Q9Y6X3 613 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 APC2O95996 2303 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 ENTPD5O75356 428 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 VAPBO95292 243 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 ELFN1P0C7U0 828 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 SSR2P43308 183 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 EPS8L3Q8TE67 593 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 FARSAQ9Y285 508 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 PDYNP01213 254 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 MSX1P28360 303 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
AFF3-201ENST00000317233 FAM92BQ6ZTR7 304 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 NIFKQ9BYG3 293 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TP73O15350 636 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 VIPP01282 170 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 MAGEA6P43360 314 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 FAM124AQ86V42 546 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 SEMA4BQ9NPR2 832 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
AFF3-201ENST00000317233 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 PCDHGB1Q9Y5G3 927 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 AP2A2O94973 939 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 CTNNB1P35222 781 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 RNASEH2BQ5TBB1 312 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 CCNI2Q6ZMN8 369 aaPredicted RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
AFF3-201ENST00000317233 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 TCF7L1Q9HCS4 588 aa13.18□□□□□ -0.3
AFF3-201ENST00000317233 SLC25A14O95258 325 aaPredicted RBP13.17□□□□□ -0.3
AFF3-201ENST00000317233 C22orf31O95567 290 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 IL33O95760 270 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 PPIBP23284 216 aaKnown RBP13.17□□□□□ -0.3
AFF3-201ENST00000317233 APLP1P51693 650 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 ARPC4P59998 168 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 ZDHHC17Q8IUH5 632 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 CADM2Q8N3J6 435 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 LGR4Q9BXB1 951 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 FAM105AQ9NUU6 356 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 SSX5O60225 188 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 LCN1P1Q5VSP4 162 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
AFF3-201ENST00000317233 TUBGCP5Q96RT8 1024 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 IL22Q9GZX6 179 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
AFF3-201ENST00000317233 VNN2O95498 520 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 PGAM1P18669 254 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 CRISP1P54107 249 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
AFF3-201ENST00000317233 BTBD10Q9BSF8 475 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 SPATA7Q9P0W8 599 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 C14orf166Q9Y224 244 aaKnown RBP13.17□□□□□ -0.3
AFF3-201ENST00000317233 PLEKHA6Q9Y2H5 1048 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 WDR27A2RRH5 827 aa13.17□□□□□ -0.3
AFF3-201ENST00000317233 FFAR3O14843 346 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms