RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TECRLQ5HYJ1 363 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PPP1R26Q5T8A7 1209 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ANKS6Q68DC2 871 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 P2RY8Q86VZ1 359 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 HPS1Q92902 700 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 L3HYPDHQ96EM0 354 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RNF145Q96MT1 663 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DACH2Q96NX9 599 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ASPSCR1Q9BZE9 553 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM39BQ9GZU3 492 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 COMMD8Q9NX08 183 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MTRRQ9UBK8 725 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 HMGXB4Q9UGU5 601 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MKLN1Q9UL63 735 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CARD8Q9Y2G2 431 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC154A6NI56 674 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SYCE1LA8MT33 242 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SNPHO15079 494 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CRCPO75575 148 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MYO1DO94832 1006 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SNX4O95219 450 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ANXA6P08133 673 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 BMP1P13497 986 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NFKB2Q00653 900 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CERCAMQ5T4B2 595 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PTF1AQ7RTS3 328 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 IFNEQ86WN2 208 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SCML4Q8N228 414 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TXNDC5Q8NBS9 432 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD13Q8WZ19 329 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PEX13Q92968 403 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RBM4BQ9BQ04 359 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FEM1AQ9BSK4 669 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RBM4Q9BWF3 364 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CHST12Q9NRB3 414 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CMTM6Q9NX76 183 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZIM2Q9NZV7 527 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 HEMK1Q9Y5R4 338 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DCLK1O15075 740 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 USP12O75317 370 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CD4P01730 458 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NCAM1P13591 858 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CD247P20963 164 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RIPPLY1Q0D2K3 151 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 LCP2Q13094 533 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PLCL1Q15111 1095 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PERM1Q5SV97 790 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DCP2Q8IU60 420 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ADHFE1Q8IWW8 467 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CADM3Q8N126 398 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DPP10Q8N608 796 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC185Q8N715 623 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FCGR1BQ92637 280 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FUNDC2Q9BWH2 189 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 KAT8Q9H7Z6 458 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NAALAD2Q9Y3Q0 740 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 YDJCA8MPS7 323 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 NUAK1O60285 661 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SYNCRIPO60506 623 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 EDN1P05305 212 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CCNCP24863 283 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RXRGP48443 463 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PLA2G16P53816 162 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 BNC1Q01954 994 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MBTD1Q05BQ5 628 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MAP1SQ66K74 1059 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HIPK1Q86Z02 1210 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 REPS2Q8NFH8 660 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 DNAJB8Q8NHS0 232 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MARK4Q96L34 752 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 NAA50Q9GZZ1 169 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 POLG2Q9UHN1 485 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FIS1Q9Y3D6 152 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GABRDO14764 452 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZBTB24O43167 697 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MSI1O43347 362 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MED26O95402 600 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CYP3A5P20815 502 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TGM1P22735 817 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 S100A5P33763 92 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ABCG1P45844 678 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GTF2A2P52657 109 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HIST2H2ACQ16777 129 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SLC10A6Q3KNW5 377 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 BTBD8Q5XKL5 378 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FUNDC1Q8IVP5 155 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 OFCC1Q8IZS5 231 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 C2CD4AQ8NCU7 369 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 BIRC7Q96CA5 298 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 KIF12Q96FN5 646 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 OMDQ99983 421 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ATP13A3Q9H7F0 1226 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 POPDC3Q9HBV1 291 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PCDHGA11Q9Y5H2 935 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 395.5 ms