RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 FRMD7Q6ZUT3 714 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CRLF3Q8IUI8 442 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SLC25A41Q8N5S1 370 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TXNDC5Q8NBS9 432 aaKnown RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 VN1R2Q8NFZ6 395 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 KCNJ9Q92806 393 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 IRF7Q92985 503 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 KIAA1191Q96A73 305 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 NXNL1Q96CM4 212 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 MEAF6Q9HAF1 191 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SLC40A1Q9NP59 571 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SPHK2Q9NRA0 654 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 FBXO6Q9NRD1 293 aaPredicted RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 HCFC1R1Q9NWW0 138 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SLC39A10Q9ULF5 831 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 RGSL1A5PLK6 1076 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 C10orf142B7Z368 130 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SMAD6O43541 496 aaKnown RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TLL1O43897 1013 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 MYL2P10916 166 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 RAP1GDS1P52306 607 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CACNG1Q06432 222 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PTK2BQ14289 1009 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 HERC3Q15034 1050 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TEAD2Q15562 447 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TMEM215Q68D42 235 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CERS6Q6ZMG9 384 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CYHR1Q6ZMK1 362 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PIWIL4Q7Z3Z4 852 aaKnown RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 OR2AP1Q8NGE2 309 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 KCTD4Q8WVF5 259 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PLEKHG4BQ96PX9 1271 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 ATXN3LQ9H3M9 355 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TDP1Q9NUW8 608 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 H0Y626 953 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 STX16-NPEPL1H3BU86 382 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 STX16O14662 325 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF197O14709 1029 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TSPAN3O60637 253 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 MT-CO1P00395 513 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PRR35P0CG20 571 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CALB2P22676 271 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PTPN4P29074 926 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CTNNB1P35222 781 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PTGER3P43115 390 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TMPRSS15P98073 1019 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 ENPP2Q13822 863 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PTPRNQ16849 979 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 EML3Q32P44 896 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 ZDHHC20Q5W0Z9 365 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 MACC1Q6ZN28 852 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SLC22A9Q8IVM8 553 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 UBTD2Q8WUN7 234 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 PTERQ96BW5 349 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 SCRN2Q96FV2 425 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 LRIG1Q96JA1 1093 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 LRRC3BQ96PB8 259 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 MIPEPQ99797 713 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TMEM45AQ9NWC5 275 aa7.16□□□□□ -1.26
NPHP1-201ENST00000316534 RUVBL2Q9Y230 463 aaKnown RBP7.16□□□□□ -1.26
NPHP1-201ENST00000316534 TYW5A2RUC4 315 aaKnown RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 C2orf81A6NN90 581 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 A8MT66 165 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 CCDC22O60826 627 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 PRAMEF12O95522 483 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 MYCP01106 439 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 IRF1P10914 325 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 PSMD8P48556 350 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 TTPAP49638 278 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ATP4BP51164 291 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ATP6V0D1P61421 351 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 PCDH1Q08174 1060 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ASPHQ12797 758 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 MYLK3Q32MK0 819 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 CDKL4Q5MAI5 379 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF678Q5SXM1 525 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 AGAP9Q5VTM2 703 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 C8orf82Q6P1X6 216 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 C22orf39Q6P5X5 142 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ELMSAN1Q6PJG2 1045 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 GLT6D1Q7Z4J2 308 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 MTDHQ86UE4 582 aaKnown RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 AHI1Q8N157 1196 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 GIMAP7Q8NHV1 300 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ACTRT2Q8TDY3 377 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ZNF483Q8TF39 744 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 OSCP1Q8WVF1 389 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 RSPRY1Q96DX4 576 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 PRR11Q96HE9 360 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 ASB2Q96Q27 587 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 GCNAQ96QF7 691 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 HEY2Q9UBP5 337 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 VPS28Q9UK41 221 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 APOBEC2Q9Y235 224 aaKnown RBP7.15□□□□□ -1.26
NPHP1-201ENST00000316534 PCDHB1Q9Y5F3 818 aa7.15□□□□□ -1.26
NPHP1-201ENST00000316534 GOLGA8TH3BQL2 631 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms