RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GPR180Q86V85 440 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 KYQ8NBH2 561 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 CASP10Q92851 521 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 ELMO2Q96JJ3 720 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SLC45A3Q96JT2 553 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 PSD2Q9BQI7 771 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 PPP1R12CQ9BZL4 782 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 TBC1D13Q9NVG8 400 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 KRT37O76014 449 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 TNNC2P02585 160 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 RPL10P27635 214 aaKnown RBP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SLC7A1P30825 629 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 TAS2R39P59534 338 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 RPS3AP61247 264 aaKnown RBP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 BASP1P80723 227 aaKnown RBP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 EFNB1P98172 346 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 TRIM25Q14258 630 aaKnown RBP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 CTF1Q16619 201 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 COLGALT2Q8IYK4 626 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 VPS52Q8N1B4 723 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF687Q8N1G0 1237 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 POU5F2Q8N7G0 328 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SPATA22Q8NHS9 363 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.84□□□□□ -1.15
CNOT4-201ENST00000315544 LPGAT1Q92604 370 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 NXNL1Q96CM4 212 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 FAM167BQ9BTA0 163 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 CEP41Q9BYV8 373 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 MARCH5Q9NX47 278 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SLC25A37Q9NYZ2 338 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 SCML2Q9UQR0 700 aa7.84□□□□□ -1.15
CNOT4-201ENST00000315544 IGLV3-16A0A075B6K0 115 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 ARL5CA6NH57 179 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 ARNTLO00327 626 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 RASAL1O95294 804 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 ALDH1A3P47895 512 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 CDK9P50750 372 aaKnown RBP7.84□□□□□ -1.16
CNOT4-201ENST00000315544 MRPS6P82932 125 aaKnown RBP7.84□□□□□ -1.16
CNOT4-201ENST00000315544 HPCAP84074 193 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 BEX3Q00994 111 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.16
CNOT4-201ENST00000315544 AAK1Q2M2I8 961 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 ATG16L1Q676U5 607 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 SLC15A3Q8IY34 581 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 TBC1D15Q8TC07 691 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 ADAM32Q8TC27 787 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 PROKR1Q8TCW9 393 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 UBTD2Q8WUN7 234 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 CCDC77Q9BR77 488 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 KLHL4Q9C0H6 718 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 RETREG1Q9H6L5 497 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 PIH1D1Q9NWS0 290 aaKnown RBP7.84□□□□□ -1.16
CNOT4-201ENST00000315544 DLGAP2Q9P1A6 1054 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 TMPRSS11EQ9UL52 423 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 VANGL2Q9ULK5 521 aa7.84□□□□□ -1.16
CNOT4-201ENST00000315544 WDR91A4D1P6 747 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 PRAMEF25A6NGN4 478 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 OR7A17O14581 309 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 EEDO75530 441 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MT-CYBP00156 380 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 COPAP53621 1224 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ATP11AP98196 1134 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 REP15Q6BDI9 236 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 CES3Q6UWW8 571 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SDCCAG8Q86SQ7 713 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 PACRGLQ8N7B6 248 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MDGA1Q8NFP4 955 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 DQX1Q8TE96 717 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 BADQ92934 168 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 TRMT13Q9NUP7 481 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SMOXQ9NWM0 555 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ETAA1Q9NY74 926 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 UBQLN1Q9UMX0 589 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 A0A096LPK6 155 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MLYCDO95822 493 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 OPRD1P41143 372 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MVDP53602 400 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MLLT6P55198 1093 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 CDC42EP1Q00587 391 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 FOXM1Q08050 763 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ANO4Q32M45 955 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 CLLU1OSQ5K130 101 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 BMP8AQ7Z5Y6 402 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 NUDCD3Q8IVD9 361 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ARHGAP24Q8N264 748 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 TTC30BQ8N4P2 665 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 BCL7CQ8WUZ0 217 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SUSD6Q92537 303 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SUSD3Q96L08 255 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 ZFP42Q96MM3 310 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 IKZF5Q9H5V7 419 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 LRRC40Q9H9A6 602 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 FAM49BQ9NUQ9 324 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 TRIM13O60858 407 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 PDE5AO76074 875 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 RAG1P15918 1043 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 AKAP5P24588 427 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms